Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01423 ATGGCAAATTACTCGCAGGCCCATATTTGTCAATGTCTGCGCCGCTTATTCACTTCCCGCAGAAATTTTCCGGTGACCATCTCTAGCAACCGACGAAGGACCGGAGAAGAGTTCGTTACCGAAGTATTGGGCCTTGCTTGTGGCCTCATCGAGCTAGGAATCAGAGCTGGAGATGTTGTCGCCATTTCTGCTTATAACAGTGATTGGTATCTGGAGTGGTTATTAGCCATTGCATTTGTTGGAGGAATAGCTGCTCCTTTGAATTATCGCTGGAGTTTTGAAGAGGCAAAATTAGCAATGACAGCAGTGAGGCCAGCAATGCTGGTTACTGATGAGAGCTGTTACATGTGGTACTTAAACCTCCAGAAAAATGATATTCCAACTCTGAGGTGGCATGTTTTGTTGGGCTCCCCTTCCTCAGAATTTATTAAGTGGAATGCATTGACTCCTGAAATGCTAAAGAGACCTCCTGTGAAGCCTCTGTCATTTGATTACTCGTGGGCACCTGAAGGCGCTGTCATTATATGCTTCACTTCAGGAAGCACGGGAAAGCCCAAGGGAGTCACCCTTAGCCATGGAGCTTTTATCGTACAGTCTCTTGCAAAAATTGCCATTGTTGGTTACAGTGAGGATGATATCTATTTGCATACTGCTCCATTATGCCATATTGGTGGATTATCATCGGCCATGGCCATGCTAATGGTTGGAGGTTGCCATGTGTTGATGCCAAAGTTTGACGCACAAAGTGCTGTTGAGGCGATAGAGCAATATACTGTGACATCTCTAATCACAGTGCCTGCAATATTGGTCGAcatgattttgttaattagGAAGAAGGGGGCCTGGAAAGGAGGAGAAACTGTCAAAAGAATACTAAACGGAGGTGGGAGTCTCTCTGTTGAGCTCATCAAGGACGCTAGCATCTTCTTCCATAAAGCAAAGCTTATCTCAGCTTATGGGATGACTGAGACATGCTCTTCACTAACGTTCCAGACCCTCTATGACCCAACACATGATACCACCAGCCAGCACCTTCACGTGGTTGATAAAACAACATCTGATCTTCACCACCCACAAGGTGTCTGCCTTGGCAAGGCTGCACCCCATGTAGAACTGAAGTTATGTGTGGACGACTCTGGCCATACtggaaaaattttaactagaGGACCACATATAATGATCGGGTATTGGGGTCAAATTCCAATAAACTCATCAGATCACATGAATGAAGTTTGGCTCGATACAGGTGACATTGGATTGATTGATCATCACGGTAATCTTTGGCTGATTGGACGAGCAAATACTAGGATCAAGAGTGGTGGGGAGAACATTTACCCTGAAGAGGTTGAGGCAATTCTCCTTGAACATCCAGGAATTACTGGTGCTGTTATTGTGGGAATCCCAGATGCTCGCCTGACGGAGATGGTTGTAGCATGTATCCGACTAAGAGAAGATTGGCAATGGTCAGAGCAATCTGTTTCAGATAAAGAGCTTCACCTATCTAGAGAGCATCTCCACCAATATTgtatggaaaagaaattaaccaGGTTCAAGATACccaagatatttattttacggAGGAAGCCTTTTCCACTCACAACCACAGGAAAACTAAGAAGACACCAAATCCAGAAGGAAGTCATAGCTCAGCTGCGATCTCTGCACAGCAACCTATG 1676 0.4362 MANYSQAHICQCLRRLFTSRRNFPVTISSNRRRTGEEFVTEVLGLACGLIELGIRAGDVVAISAYNSDWYLEWLLAIAFVGGIAAPLNYRWSFEEAKLAMTAVRPAMLVTDESCYMWYLNLQKNDIPTLRWHVLLGSPSSEFIKWNALTPEMLKRPPVKPLSFDYSWAPEGAVIICFTSGSTGKPKGVTLSHGAFIVQSLAKIAIVGYSEDDIYLHTAPLCHIGGLSSAMAMLMVGGCHVLMPKFDAQSAVEAIEQYTVTSLITVPAILVDMILLIRKKGAWKGGETVKRILNGGGSLSVELIKDASIFFHKAKLISAYGMTETCSSLTFQTLYDPTHDTTSQHLHVVDKTTSDLHHPQGVCLGKAAPHVELKLCVDDSGHTGKILTRGPHIMIGYWGQIPINSSDHMNEVWLDTGDIGLIDHHGNLWLIGRANTRIKSGGENIYPEEVEAILLEHPGITGAVIVGIPDARLTEMVVACIRLREDWQWSEQSVSDKELHLSREHLHQYCMEKKLTRFKIPKIFILRRKPFPLTTTGKLRRHQIQKEVIAQLRSLHSNL 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01423 558 CDD AFD_class_I 175 539 - -
Bva13g01423 558 SUPERFAMILY Acetyl-CoA synthetase-like 8 550 - -
Bva13g01423 558 PANTHER ACYL-COA SYNTHETASE 6 547 - -
Bva13g01423 558 Gene3D - 435 550 IPR045851 -
Bva13g01423 558 Pfam AMP-binding enzyme 22 439 IPR000873 -
Bva13g01423 558 Pfam AMP-binding enzyme C-terminal domain 448 537 IPR025110 -
Bva13g01423 558 ProSitePatterns Putative AMP-binding domain signature. 175 186 IPR020845 -
Bva13g01423 558 Gene3D - 1 434 IPR042099 -
Bva13g01423 558 PANTHER ACYL-COA SYNTHETASE FAMILY MEMBER 2, MITOCHONDRIAL 6 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01423 Bva-Chr13 7474622 7479371 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01423 16 553 Monolignol Biosynthesis Gene Families AT4G05160 26.408 5.58e-42 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01423 K14760 - gmx:100809925 842.032