Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01417 ATGGAGTATGATTCGGAGGATGAAAACAGTGATAGATCAATTGGGAATGATTCTgcagagaggaaaaaagacaaaaataaaagaacaggACAAGCGGTTGAAGGCATGGATGAAGGTCACCCTGGAAATAGAGGGATAGATGAAGGCACATGTAAAGGGCcaattaaaacttcaaaagatGTTGCTTATGATTTAATGCATAAAAGTCGGGGAAGCACGGGAAAGCCCAAGGGAGTCACCCTTAGTTATGGAGCTTTTATCGTACAGTCTCTTGCAAAAATTGCCATTGTTGGTTACAGTGAGGATGATATCTATCTGCATACTGCTCCATTATGCCATATTGGTGGATTATCATCAGCCATGGCCATGCTAATGGTTGGAGGTTGCCATGTGTTGATGCCAAAGTTTGACGCAGAAAGTGCTGTTGAGGCGATAGAGCAATATACTGTGACATCTCTAATCACAGTTCCTCCAATATTGGTCGatatgattttgttaattagGAAGAAGGGGACCTGGAAAGGGGGAGAAACTGTCAAAAGAATACTAAACCGAGGTGGGAGTCTCTCTGTTGAGCTCATCAAGGATGCTAGCATCTTCTTCCATAAAGCAAAGCTTATCTCGGCTTACGGTAGGTCTCTCTTATCCCAATTTAACCTCTATGACCCAACACATGATACCACCAGCCAGCACCTTCAGGTGGTTGAAAAAACAGATTCTGATCTCCTTCACCAGCCACAAGGTGTCTGCCTTGGCAAGGCTGCACCCCATGTAGAACTGAAGTTATGTGCGGACGACTCTGGCCATACtggaaaaattttaactagaGGACCACATATAATGATCGGGTATTGGGGTCAAATTCCAATTAACTCATCAGATCGCATGAATGAAGTTTGGCTCGATACAGGTGACATTGGATCGATTGATCATCACGGTAATCTTTGGCTGATTGGACGAGCAAATACTAGGATCAAGAGTGGTGGGGAGAACATTTACCCTGCAGAGGTTGAGGCAATTCTACTTGAACATCCAGGAATTGCTGGTGCTGTTATTGTGGGAATCCCAGATGCTCGCCTGACGGAGATGGTTGTAGCGTGGAACAAAACCTCTAGGCCTGGGTTCGAGACCAACCTCGCCCTACCTAGAGGACAATACCTTGGGGCCTGGCCCCAACAAGAAGATTGGCAATGGTCAGAGCAATCTATTTCAGATAAAGAGCTTCACCTATCCAGAGAGCATCTCCACCAATATTgtatggaaaagaaattaactagGTTCAAgataccaaaaatatttatttg 1304 0.4126 MEYDSEDENSDRSIGNDSAERKKDKNKRTGQAVEGMDEGHPGNRGIDEGTCKGPIKTSKDVAYDLMHKSRGSTGKPKGVTLSYGAFIVQSLAKIAIVGYSEDDIYLHTAPLCHIGGLSSAMAMLMVGGCHVLMPKFDAESAVEAIEQYTVTSLITVPPILVDMILLIRKKGTWKGGETVKRILNRGGSLSVELIKDASIFFHKAKLISAYGRSLLSQFNLYDPTHDTTSQHLQVVEKTDSDLLHQPQGVCLGKAAPHVELKLCADDSGHTGKILTRGPHIMIGYWGQIPINSSDRMNEVWLDTGDIGSIDHHGNLWLIGRANTRIKSGGENIYPAEVEAILLEHPGIAGAVIVGIPDARLTEMVVAWNKTSRPGFETNLALPRGQYLGAWPQQEDWQWSEQSISDKELHLSREHLHQYCMEKKLTRFKIPKIFI 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01417 434 Gene3D - 32 323 IPR042099 -
Bva13g01417 434 PANTHER ACYL-COA SYNTHETASE FAMILY MEMBER 2, MITOCHONDRIAL 67 433 - -
Bva13g01417 434 MobiDBLite consensus disorder prediction 8 45 - -
Bva13g01417 434 PANTHER ACYL-COA SYNTHETASE 67 433 - -
Bva13g01417 434 MobiDBLite consensus disorder prediction 1 53 - -
Bva13g01417 434 SUPERFAMILY Acetyl-CoA synthetase-like 71 433 - -
Bva13g01417 434 CDD AFD_class_I 60 367 - -
Bva13g01417 434 Gene3D - 324 434 IPR045851 -
Bva13g01417 434 Pfam AMP-binding enzyme 58 327 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01417 Bva-Chr13 7440671 7445225 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01417 24 367 Monolignol Biosynthesis Gene Families AT1G20480 28.490 2.55e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01417 K14760 - gmx:100787691 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01417 13 7440671 7445225 Bva13g01417 13 7440671 7445225 ECH