Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01402 ATGCTGCTACATAAGCTCGTGgtcattttggtcattttctGGAGCTGGCCATGGTGGAGCTCTCCCTCCGCAGTTGCAGACCCACAGATTCTTCTGCTAAACAGCGGTTGCAGCCAATACAACGCCACCAACTTGTCCACCTTCAATTCCAATCTAAACGCATCGTTTTTGGACCTCAGAACGCAAGTTGGCAATCAAAGCAAGCGTTTCGCGACGGCACAGAGCGCCAGAGGAGCTGACCCTGTTTATGCTCTGTTTCAGTGCAGGAATTATCTCTCCAACGCCGACTGTCTCGCTTGCTTCACCGCCGCCGCTGCCCAGATCCGAAACTGCTCCGCCGGAGCCAACGGTGCCCGCGTCATCTATGACGGCTGCTTGCTCAGGTATGAGAGTGCTAGCTTCTTTGACCAAACCACTTTGGCTGGCAATAGCATGATCTGTGGTAATCAGACAGCAACTGGAGCCACAGCATTCACTACAGCAGCAGAACAAGTGCTGATGGATCTTCAAGTGGCTACACCCAAAATCAGTGGCTTCTATGCAGCTACCAAGACACCATTGGCTGGTGCTGCTGGCAATGCATCCATCTATGCCATTGCACAATGTGCAGAAACTGCCACAGAGAGTGATTGCTTGCAGTGCTTGCAAGTTGGATTCAACAACATACAGAGTTGTCTTCCCAATACAGATGGAAGAGCATTTGATGCTGGTTGTTTCATGAGATATTCACAGACACCCTTTTTTGCTGATAACCAGACCATTGATATCACATCATTTCTTAAACAAGGTGGTTCAAGCAACAAGGGGGCCATTATTGGTGGAGTTGTTGGAGGTGTAGCTCTTGTTCTTATCCTTCTTGCATTATTTTTCTGGCTTAGACGATCAAGAAGACCTAGAAGGGTTCCTAGAGGTGATATATTGGGGGCAACAGAGTTGAAAGGTCCAGTTAACTATAGGTATAGAGATTTGAAGACTGCAACAAGCAATTTCAGTGAAGCAAATAAACTTGGAGAAGGAGGTTTTGGTGATGTATACAAGGGAACTTTGAAGAATGGGAAAGTAGTTGCAGTGAAGAAACTAGTTTTTGGCCAATCCAATCGGatagatgaaaattttgaaagtgaaGTGAAGCTTATAAGCAATGTTCATCATCGAAACCTTGTTCGCCTACTTGGATGTTGCAGCAAAGGCCGCGAGAGAATCCTTGTTTATGAATACATGGCAAATGGCAGCCTTGACAGATTCTTATTTGGTGAAAGGAGAGGTTCCCTCGACTGGAAGCAACggtttgatttaattttaggcACGGCAAGAGGTCTGACTTATTTGCACGAGGAATTTCATGTCTGTATCATTCATAGAGATATAAAAACTAGTAATATCCTTTTGGACGATGATCTTCAAGCCAGAATTGCTGATTTCGGGCTGGCAAGGCTTCTGCCAGGGGACCAATCTCATCTTAGCACAAAATTTGCAGGAACATTGGGATACACGGCACCGGAGTATGCAATCCACGGTCAATTATCCGAGAAAGCCGATACTTACAGCTATGGTATTGTGGTCCTAGAAATAGTAAGTGGCCAAAAGAGCAGTGAATTAAGGGTTGATAATGCTGATGGTGAATTCCTCCTCCAAAGGGCATGGAAACTCTATGAGAGAGGCATGCACATAGAATTGGTGGATGAAACCTTAGAACCTAATGACTATGATGCAGAAGATGTGAAGAAAGTCATAGAGATTGCCTTGCTGTGCACGCAAGCATCAGCTGCAGCAAGGCCAACAATGTCTGAAGTTGTTGTTCTGCTAAAAAGCAAGGGCATGCTGGAGCAACTGAGACCTACTATGCCGGTTTTCGTGGGTTCGAATTTTAGGTCCCGGGGAGATACATCCACCTCAACTGCTTCCACTGCATCCAATGCTACTGCCTCCATTTCTGTAGTTTCAGCGCGGTG 1952 0.4498 MLLHKLVVILVIFWSWPWWSSPSAVADPQILLLNSGCSQYNATNLSTFNSNLNASFLDLRTQVGNQSKRFATAQSARGADPVYALFQCRNYLSNADCLACFTAAAAQIRNCSAGANGARVIYDGCLLRYESASFFDQTTLAGNSMICGNQTATGATAFTTAAEQVLMDLQVATPKISGFYAATKTPLAGAAGNASIYAIAQCAETATESDCLQCLQVGFNNIQSCLPNTDGRAFDAGCFMRYSQTPFFADNQTIDITSFLKQGGSSNKGAIIGGVVGGVALVLILLALFFWLRRSRRPRRVPRGDILGATELKGPVNYRYRDLKTATSNFSEANKLGEGGFGDVYKGTLKNGKVVAVKKLVFGQSNRIDENFESEVKLISNVHHRNLVRLLGCCSKGRERILVYEYMANGSLDRFLFGERRGSLDWKQRFDLILGTARGLTYLHEEFHVCIIHRDIKTSNILLDDDLQARIADFGLARLLPGDQSHLSTKFAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIVSGQKSSELRVDNADGEFLLQRAWKLYERGMHIELVDETLEPNDYDAEDVKKVIEIALLCTQASAAARPTMSEVVVLLKSKGMLEQLRPTMPVFVGSNFRSRGDTSTSTASTASNATASISVVSAR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01402 650 ProSiteProfiles Gnk2-homologous domain profile. 140 247 IPR002902 -
Bva13g01402 650 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 21 647 - -
Bva13g01402 650 Gene3D Single helix bin 259 297 - -
Bva13g01402 650 Gene3D Transferase(Phosphotransferase) domain 1 407 615 - -
Bva13g01402 650 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Bva13g01402 650 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 21 647 - -
Bva13g01402 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Bva13g01402 650 SMART serkin_6 330 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01402 650 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Bva13g01402 650 Pfam Salt stress response/antifungal 147 244 IPR002902 -
Bva13g01402 650 CDD STKc_IRAK 336 603 - -
Bva13g01402 650 SUPERFAMILY Protein kinase-like (PK-like) 313 602 IPR011009 -
Bva13g01402 650 Gene3D - 30 134 IPR038408 -
Bva13g01402 650 Gene3D - 141 247 IPR038408 -
Bva13g01402 650 Pfam Protein tyrosine and serine/threonine kinase 333 600 IPR001245 GO:0004672|GO:0006468
Bva13g01402 650 Gene3D Phosphorylase Kinase; domain 1 306 406 - -
Bva13g01402 650 ProSiteProfiles Protein kinase domain profile. 330 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01402 650 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01402 Bva-Chr13 7364180 7369620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01402 37 650 Receptor kinase-like Gene Family AT1G70520 39.005 1.85e-130 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva13g01402 PK_Tyr_Ser-Thr 3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01402 - - gmx:100811953 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01402 13 7364180 7369620 Bva13g01402 13 7364180 7369620 ECH