Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01380 ATGGCACCAGTTTCATTGCCTCCTGGTTTCAGGTTCCACCCCACTGATGAAGAGCTCGTAGGTTATTATCTCAAGAGGAAAATTAATGGCAGAAAAATTGAACTTGAGATCATCCCTGAGGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAgGAAAATCATTGTTGCCGGGAAAAGATCTAGAATGGTATTTCTTCAGCCCTCGCGATCGGAAGTACCCGAATGGATCAAGAACCAATCGAGCAACTAATTCTGGATACTGGAAGGCCACAGGAAAAGATAGGAAAGTGAACTCTCAATCTCGTGCTGTGGGGAGTAAGAAAACCCTAGTTTACTATCGAGGAAGAGCACCACATGGTTGCCGTACAGGTTGGGTTATGCATGAGTATCGTCTTGATGAGAGGGAATGTGAAACTGCTTCTGGATTGCAGGATGCATATGCACTTTGCCGTGTGTTCAAGAAAACTGCAGTGGTTGCACCAAAAATTGTAGATCAACACTATGCTAGTAGCCATGCAAATCAGATTACCAGTGATCGATCATCCAGCATTGAACTATACTCTGAAGGAAGATGTGAAGATTTAGAGAGCTCAggttataataaattgatgCCATTGGAATTAAATGGGGCTTCACTCACTATCAATAACAATAGTGGGGCAATAAGGGATCATGGAAAATGGTCACAGTTCGTATCAGAAGACCATTTTAGTCTTCCAACTTCTTCATTTCCTAACTATGGACCCATATCATACCCTCCATCCAagGTGGATATAGCATTAGAGTGTGCATGGATGCAACATAGGTTTACTATGCCTCCATTGGAGGTGGAGGATTTCCCTCAAGTGGGAATTTCTGAACTGAAAATGCCACTTGGTGCCATGCAACATGGAAGCAGAATTAATAATGAGACAGATATCGTGCAGGAAATTCTTTCAGTTGCTCAAGTTTCCCAGGAGCTGATAAACCAGTCCAACTATTATTCAACACAGACATGGGGTGGAAATGAAAACTGTGCTCCCCAAGATGATTTCACATTCATGATTGGCAACAAAGACACTAGTAGTTACAACCACATGAATGATTTGGATGGTTCCATGAGATATTTTGACAAAACATGGGAAGATCCAAACCCGGTGAGGTCTATAGATATTGGAAATTTGGATGATGAATTCAAAGCAGAGAGGATGatggagaatttgagatgGGTTggaatgtcaggcaaagaattagaaaagAGCTTTATGGAAGAGCAAAAGATTGTTCAAATTGAAGATATTTCAGGCTTTCAAGCAATCAGGGAAGAGGTTGACGAGGTGCAAGGAGACCATAGTGAGCTGAATGATAGCAACAAGCCTTTCAGTGATACAGACATCAATGATTTCTCATTAGGGTTCATCAACGATATCGATGATCCAAACGAAAACTTCATAGATGAAGGAGGAAACATGGATAATTATTCAAGTTCTCCAAGCTTTGAGGTTGTGGAAGAAATCAAAGTGAGCCATGGAATGTTTGTTTCAAATCGCCAAGCGGCCGAGACATTCTTCCACAAAATAGTTCCTTCAGAAACAGTCAAGGTTCACTTAAACCCAGCAGTGATGGCAAACAACATTGTTTCCATAGATCATGAACTGACCCAAATGAAGCCCTTCAGAAAATTGAAGACCCATGTGATGGGGaagctaataaaattaaaaaaggcaATAGCAAGGTCCATTGTATATATCTTCGCTCTTCTGTTCATGCATTATGTATATTTGAAGGAACAAATGGAGAATTTGAAGTCAGATCCAGAGGATGCTAAAGAGAAAGGTTGCTTGCAGAGAAGGCAACTATCAGCTGAGAAAATCAAATGCACTATTGTGAGTGATCAAGAAAAGGTTTGGTTTGTTGGTATCAGAAGTGGGAAAGGGTTTAGTGTGGTGTTGAAGAAGATAGGCATTTTTCTCACCATATCATTTGCTCTTTGTACCATGTGGGCTAACCACATCATAGTTAATTA 2009 0.3942 MAPVSLPPGFRFHPTDEELVGYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATNSGYWKATGKDRKVNSQSRAVGSKKTLVYYRGRAPHGCRTGWVMHEYRLDERECETASGLQDAYALCRVFKKTAVVAPKIVDQHYASSHANQITSDRSSSIELYSEGRCEDLESSGYNKLMPLELNGASLTINNNSGAIRDHGKWSQFVSEDHFSLPTSSFPNYGPISYPPSKVDIALECAWMQHRFTMPPLEVEDFPQVGISELKMPLGAMQHGSRINNETDIVQEILSVAQVSQELINQSNYYSTQTWGGNENCAPQDDFTFMIGNKDTSSYNHMNDLDGSMRYFDKTWEDPNPVRSIDIGNLDDEFKAERMMENLRWVGMSGKELEKSFMEEQKIVQIEDISGFQAIREEVDEVQGDHSELNDSNKPFSDTDINDFSLGFINDIDDPNENFIDEGGNMDNYSSSPSFEVVEEIKVSHGMFVSNRQAAETFFHKIVPSETVKVHLNPAVMANNIVSIDHELTQMKPFRKLKTHVMGKLIKLKKAIARSIVYIFALLFMHYVYLKEQMENLKSDPEDAKEKGCLQRRQLSAEKIKCTIVSDQEKVWFVGIRSGKGFSVVLKKIGIFLTISFALCTMWANHIIVN 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01380 669 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 401 - -
Bva13g01380 669 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 401 - -
Bva13g01380 669 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Bva13g01380 669 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Bva13g01380 669 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Bva13g01380 669 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01380 Bva-Chr13 7232254 7236641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01380 1 661 NAC Transcription Factor Family AT1G65910 45.376 7.57e-168 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva13g01380 NAM 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01380 - - gsj:114381841 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01380 13 7232254 7236641 Bva13g01380 13 7232254 7236641 ECH