Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01371 ATGGTTCTCTCCAAAGCCGCTCCCCATTCCGATGTGTCCGTACACTCCACTTTCGCTTCTCGCTACGTCCGCGCCCCGCTTCCAAGGTTCAGGATGCCGGAGGAATCGATTCCGAAGGAGGCGGCGTACCAGATCATCAACGACGAACTGATGCTCGACGGAAACCCGCGGCTGAATCTGGCGTCGTTCGTGACGACGTGGATGGAGCCGGAGTGCGATAAGCTCATCATGTCTTCCATTAACAAGAACTACGTCGACATGGATGAGTATCCAGTTACCACTGAGCTACAGAACCGGTGTGTCAATATGATAGCTCATCTTTTCAATGCACCACTTGAAGAGTCAGAGACTGCAATTGGATGTGGCACTGTTGGGTCATCAGAGGCCATTATGTTGGCAGGATTAGCATTCAAGAGGAAGTGGCAGAACAAGAGGAGAGCAGCAGGATTGCCAATTGACAAGCCCAACATTGTCACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTCGAAGTGGAGCTGAAAGAGGTGAACCTTAGGGATGGATACTACGTAATGGACCCTGAGAAAGCAGCTGAACTGGTGGATGAGAACACCATCTGTGTTGCTGCCATTCTTGGTTCCACACTCAATGGAGAATTTGAAGATGTCAAACGCTTGAATGATCTCCTAGTCGAAAAGAACAAGGAAACTGGATGGGATACTCCAATTCATGTGGACGCGGCCAGTGGTGGCTTCATTGCACCATTTATATATCCAGATCTTGAATGGGATTTCCGATTGCCACTGGTGAAGAGCATCAACGTTAGTGGCCACAAGTATGGACTTGTCTATGCCGGAATCGGTTGGGTTATCTGGAGAAGCAAGGAGGACTTGCCTGATGAACTCATCTTCCACATCAACTATCTTGGAGCTGATCAACCTACTTTCACCCTCAACTTCTCCAAAGGTTCTAGTCAAGTTATTGCTCAGTACTACCAACTAATTCGCTTGGGTTATGAGGGATACAAGAATGTGATGGAAAACTGCAGAGACAACATGTTGGTACTTAAAGAGGGACTCGAGAAAACAGGGCGTTTCAACATTGTATCCAAAGAGGAGGGAGTACCTTTGGTGGCCTTCACATTGAAGGACAACAGCCACTTCGACGAGTTCCAAGTCTCTCACTTGCTGAGACGCTATGGCTGGATAGTGCCAGCATACACAATGCCTCCCGATGCCCAGCATGTGACCGTGCTTCGCGTTGTCATCAGAGAGGACTTTTCTCGAACACTTGCTGAGCGTATCGTGATTGACATTCAGAAAGTGCTGCACGAGCTCGATGCCCTTCCTGTAAGGGTTGCAGAAGCCGCTACTGTGGCTGTTAGCAGCGAAGATATTGGTGGCGATGGCGCTACAGAGAACATTGCTAAGAAGACTGCGCTGGAGACAACAAGGGAGATTACCAATGCATGGAAGAAATTTGTGATGGAcaggaagaagatgaatggAAAGATTAATGGTGTTTGCTA 1523 0.4787 MVLSKAAPHSDVSVHSTFASRYVRAPLPRFRMPEESIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEESETAIGCGTVGSSEAIMLAGLAFKRKWQNKRRAAGLPIDKPNIVTGANVQVCWEKFARYFEVELKEVNLRDGYYVMDPEKAAELVDENTICVAAILGSTLNGEFEDVKRLNDLLVEKNKETGWDTPIHVDAASGGFIAPFIYPDLEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYKNVMENCRDNMLVLKEGLEKTGRFNIVSKEEGVPLVAFTLKDNSHFDEFQVSHLLRRYGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERIVIDIQKVLHELDALPVRVAEAATVAVSSEDIGGDGATENIAKKTALETTREITNAWKKFVMDRKKMNGKINGVC 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01371 507 Gene3D - 66 360 IPR015421 GO:0003824
Bva13g01371 507 Gene3D - 361 448 - -
Bva13g01371 507 PANTHER GLUTAMATE DECARBOXYLASE 1 507 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bva13g01371 507 CDD DOPA_deC_like 59 439 - -
Bva13g01371 507 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Bva13g01371 507 Gene3D - 1 65 - -
Bva13g01371 507 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bva13g01371 507 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bva13g01371 507 PANTHER GLUTAMATE DECARBOXYLASE 1 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01371 Bva-Chr13 7154695 7160042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01371 1 501 Calmodulin-binding Proteins AT5G17330 82.635 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01371 K01580 - gmx:100796533 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01371 13 7154695 7160042 Bva13g01371 13 7154695 7160042 ECH