Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01355 ATGATACCAAATTTTGATCTGGAAGTGGAGGCCACTGCAGAAAATGAACCTGAAGTTTGCAGGCAGGTCGCGTCCAATATATCTTTCTTAGAAACAACTGCAGGTCCTTGCAGTGAGACCTTGACTAACTCTTCCAACCTTGCAAATCCAATGGGGAATGATCCAAATTCAGATGCTGTTTCACTTGATTTAACTCTAAACTTCAATAATAATGAGTCAGGGCCAAGAGATTCGACAAGACTCTCATTCTCAAGCACTAGTGAGAGTAGCAATGAACCTGCCTCTCAAACTACAACAGCAACCGTTCTACGGGTATTCTCTTGCAACTACTGTCAGCGCAAATTCTTTAGCTCACAGGCTCTTGGTGGCCATCAGAATGCACACAAGAGAGAAAGATCAATAGCAAAGAGGGCTATGCGTATGGGTTTATTTTCTGAGAAATATGCCAGTCTAGCATCTCTGCCTCTGCATGGTTCTTTCGGGTCCTTAGGGATAAAAGCACATTCTTCGGTGCACCAAGGTTTTTCAAGGCCTGCTGAGATTAAAAGCAATGCAAGATTTGAGCAAGGATATCTGAACATGCCCTTGTTCTTGGAGGATGAGGAAGCAGAACTGTTGTGGCCCGGTAGTTTCCGTCAAGTTTCTGAGGTAGGTAATACACATCAGGATTTCATAGTGACTGGAAATTCAGATTTAACTTTTACAGAGGTGAATCCACAAGTAGACTTAGACAACTCCACACCAGATTTGACACTGAAACTCTG 764 0.4306 MIPNFDLEVEATAENEPEVCRQVASNISFLETTAGPCSETLTNSSNLANPMGNDPNSDAVSLDLTLNFNNNESGPRDSTRLSFSSTSESSNEPASQTTTATVLRVFSCNYCQRKFFSSQALGGHQNAHKRERSIAKRAMRMGLFSEKYASLASLPLHGSFGSLGIKAHSSVHQGFSRPAEIKSNARFEQGYLNMPLFLEDEEAELLWPGSFRQVSEVGNTHQDFIVTGNSDLTFTEVNPQVDLDNSTPDLTLKL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01355 254 SUPERFAMILY beta-beta-alpha zinc fingers 104 133 IPR036236 -
Bva13g01355 254 MobiDBLite consensus disorder prediction 68 96 - -
Bva13g01355 254 Gene3D Classic Zinc Finger 83 153 - -
Bva13g01355 254 PANTHER ZINC FINGER PROTEIN JAGGED 1 254 IPR045320 GO:0003700
Bva13g01355 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 133 IPR013087 -
Bva13g01355 254 PANTHER ZINC FINGER PROTEIN 3-RELATED 1 254 - -
Bva13g01355 254 ProSitePatterns Zinc finger C2H2 type domain signature. 108 128 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01355 Bva-Chr13 7065042 7069364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01355 1 254 C2H2 Transcription Factor Family AT1G66140 44.291 2.13e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva13g01355 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01355 - - gmx:100794851 383.259