Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01354 atgaagaagaaaactaaaacCCATCTGGGTTTTGAGCTTTTAGCCATTTTCCTTGCTGGGTTCTCCTCAAATTTCCTCCGCGTTGAGTCTCAAAGCCAAGATGCTGATGTAATGCTTGCTCTCAAGAAGAGCCTCAACGTTCCGGAGTCTCTGTGGTCTGGTTCGGACCCCTGCAACTGGAAAAAAACCGTTGCTTGCTCCAAGGAGGGAAGAATTACGCGGATCCAACTCGGCAGAAAAGGCCTTCAAGGTACGCTTCCACCGAATCTCCGGAATCTTACCGAGTTGCAGATTTTTGAGCTCCAATATAATAACATTTCGGGTGCTCTTCCCAGCTTAAGTgggttaaataaattacaaagtaTTTTGGTTGATGACAATCAATTTGAATCTATCCCTAGCGACTTCTTCACTGGAATGACTTTGCTTGAGACCGTGGATATTGACAACAACCCGTTTTCGGCTTGGGAAATACCTGTGAGTCTCAAAGACGCTACGCAACTTCGGAGCTTTTCAGCGAATAGTGCGaatattaaaggaaaaataccagattTTTTTAACGCGGACGTCTTTTCTAGTCTGACAAGTTTGCATTTGGCTGGCAATGACCTTGAGGGTGGGTTGCCTGCCAGCTTTGCTGGGACGCAAATTCAGTCCTTGTGGCTTAATGGGCAAAAGAGTAAGCTTTCTGGACGCATAGATGTTATACAGAACATGACTTATTTACAAGAGCTTTGGTTAAACTTGAATGGTTTTACGGGTCCATTACCAGACTTTTCGGGTTTGAAAGATTTGCAGAGATTGAATTTGAGGGATAATTCGCTTACGGGTCCTGTTCCAGCGTCATTGCTGAGTCTTCCATCACTGCTAGTCGTAAATTTCACTAATAACATGCTTCAAGGGTCAGTGCCGGTGTTTAAACCTGGGGTTGCTGTGGATATGAATAAGGATTCGAATAGCTTTTGCTTACCAAACCCTGGGAATTGTGATCCACGGGTTAATTCTCTGCTTTCTGTTGCTCAGTTAATGGACTATCCTCTAACGTTTGCCCATAGTTGGAAGGGGAATGATCCATGTCAGGATTGGATTGGAATTGCATGTCCTAATGGGAACATAAGTGTTGTCAATTTCCAGAAGATGGGGCTCACCGGTGAAATATCTCCTGCTTTTGCTTCACTTTCATCGCTGCAAAAACTTCTTCTTGCTGATAACAATCTCACTGGTACCATTCCAGAGAGCCTTACCAGTTTGCCTCGGCTTACTGAATTCAATGTTGCAAACAATCAGCTTTATGGAAAAATCCCAAATTTTAGGAGTAATGTAAATTTGATCACAACTGGTAACAAAGATATAGGGAAGGATAGAAGCAGTTCTCCCCCTAGTAGTGGGACACCTCCCTCTGATGCTGGGGGAAGTTCTGGAACTGGTGGCAGAAGAGCTCATGTAGGAGTAATTGTGCCTGCTGTGATTGGGACCGTCTTGGTGCTTTGCTTGATTGGTTTCGTAGCTTTCTGCTGGTTTAGAATGAAACGAAAGAAGTTAAGCAGGGTGCAGAGCCCGAATGCACTCGTTGTTCACCCCCGTCATTCTGGGTCAGATAATGAAAGCATGAAGATAACAGTTGCTGGTTCAAGTGTCAGTGTTGGTGCAGTTAGTGAAGCACAAACTGTACCCAGTAGTGAGGCAGGAGACGTCCAAATGGTTGAAGCAGGAAACATGGTCATTTCTATACAAGTTCTGAGGACTGTAACTGACAATTTCAGTGAGGAAAATATATTAGGAAAGGGGGGTTTTGGAACAGTTTATAAAGAAGGAAAAGCATCAATAGAAACGAGAATTGCTGGAACTTTTGGATATTTGGCACCAGAATATgcagTTACCGGTCGGGTGACAACCAAAGTTGATTTATACAGTTTTGGGGTAATATTGATGGAACTGATAACGGGAAGGAAAGCACTAGACGAGACCCAACCTGAGGACAGCATGCACCTTGTAACATGGTTCCGCAGAATGTACATAAACAAGGACACATTCAAAAAGGCCATTGACCCCACAATTGAGCTCAATGAGGACAGCCTTGCAAGTATCCTCACTGTAGCAGAGTTAGCTGGCCACTGCTGCGCAAGGGAGCCCTATCAAAGACCAGACATGGGTCATGCTGTTAACGTGCTTTCTTCTCTTGTAGAGCTATGGAAACCATCTGATCAGAACTCTGAAGACATATATGGCATTGACCTTGACATGTCTTTACCTCAAGCACTTAAGAAGTGGCAGGCTTTTGAAGATGGAAGCCAATCGGagtcttcatcttcttcccttCTTCCTAGCCGGGACAACACACAGACAAGCATACCGCCACACCCATATGGTCTTGCCAACAGTTTCTCATCAGCCGACGCCAGGTG 2405 0.4328 MKKKTKTHLGFELLAIFLAGFSSNFLRVESQSQDADVMLALKKSLNVPESLWSGSDPCNWKKTVACSKEGRITRIQLGRKGLQGTLPPNLRNLTELQIFELQYNNISGALPSLSGLNKLQSILVDDNQFESIPSDFFTGMTLLETVDIDNNPFSAWEIPVSLKDATQLRSFSANSANIKGKIPDFFNADVFSSLTSLHLAGNDLEGGLPASFAGTQIQSLWLNGQKSKLSGRIDVIQNMTYLQELWLNLNGFTGPLPDFSGLKDLQRLNLRDNSLTGPVPASLLSLPSLLVVNFTNNMLQGSVPVFKPGVAVDMNKDSNSFCLPNPGNCDPRVNSLLSVAQLMDYPLTFAHSWKGNDPCQDWIGIACPNGNISVVNFQKMGLTGEISPAFASLSSLQKLLLADNNLTGTIPESLTSLPRLTEFNVANNQLYGKIPNFRSNVNLITTGNKDIGKDRSSSPPSSGTPPSDAGGSSGTGGRRAHVGVIVPAVIGTVLVLCLIGFVAFCWFRMKRKKLSRVQSPNALVVHPRHSGSDNESMKITVAGSSVSVGAVSEAQTVPSSEAGDVQMVEAGNMVISIQVLRTVTDNFSEENILGKGGFGTVYKEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDLYSFGVILMELITGRKALDETQPEDSMHLVTWFRRMYINKDTFKKAIDPTIELNEDSLASILTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPSDQNSEDIYGIDLDMSLPQALKKWQAFEDGSQSESSSSSLLPSRDNTQTSIPPHPYGLANSFSSADAR 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01354 801 SUPERFAMILY Protein kinase-like (PK-like) 610 737 IPR011009 -
Bva13g01354 801 Pfam Leucine Rich Repeat 265 286 IPR001611 GO:0005515
Bva13g01354 801 PANTHER RECEPTOR PROTEIN KINASE TMK1 604 801 - -
Bva13g01354 801 PANTHER RECEPTOR PROTEIN KINASE TMK1 19 603 - -
Bva13g01354 801 MobiDBLite consensus disorder prediction 759 790 - -
Bva13g01354 801 Gene3D Transferase(Phosphotransferase) domain 1 584 746 - -
Bva13g01354 801 MobiDBLite consensus disorder prediction 448 471 - -
Bva13g01354 801 Pfam Protein kinase domain 599 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01354 801 SMART LRR_typ_2 116 139 IPR003591 -
Bva13g01354 801 SMART LRR_typ_2 262 286 IPR003591 -
Bva13g01354 801 SMART LRR_typ_2 191 214 IPR003591 -
Bva13g01354 801 SMART LRR_typ_2 393 417 IPR003591 -
Bva13g01354 801 SMART LRR_typ_2 93 115 IPR003591 -
Bva13g01354 801 Gene3D Ribonuclease Inhibitor 31 329 IPR032675 -
Bva13g01354 801 PANTHER OSJNBA0070M12.3 PROTEIN 604 801 - -
Bva13g01354 801 PANTHER OSJNBA0070M12.3 PROTEIN 19 603 - -
Bva13g01354 801 Gene3D Ribonuclease Inhibitor 331 455 IPR032675 -
Bva13g01354 801 SUPERFAMILY L domain-like 56 444 - -
Bva13g01354 801 MobiDBLite consensus disorder prediction 759 801 - -
Bva13g01354 801 Pfam Leucine rich repeat N-terminal domain 334 367 IPR013210 -
Bva13g01354 801 Pfam Leucine rich repeat N-terminal domain 32 61 IPR013210 -
Bva13g01354 801 MobiDBLite consensus disorder prediction 448 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01354 Bva-Chr13 7052337 7056064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01354 597 730 Receptor kinase-like Gene Family AT5G07280 36.296 1.21e-15 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Bva13g01354 Pkinase 3.4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01354 - K00924 aprc:113846741 746.503