Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01348 ATGGTTCGGAAGAAGAGTGTAAAGCTGGTGGAGAAGGAAGAGGAGGAcagagaaaaggagaaggaaaCGCCGTTGTCTTCACCGTCTCAAACGACGTCGTCCTCTGATGGGAGAGAGTATGAGGTGGAGGATTTGAGCGACCGATTGGACTCGTCGCGGAGAAGCCGGTTTAATTTGATAGAGAACGAGTTGACTCGTCGGAAGTTCAGCAGCCAAGCTGTCCTCGACGGCATCAGAGTCTTCTCCTCCGAGGACTCCGTTATTCATCCCGATAACAGGTGGTATCGGGCATGGGTAAAATTCATATTGTTGTGGGCAGTGTATTCATCCTTCTTCACTCCGATGGAATTCGGATTTTTTCGTGGGCTGCCTGAGAATCTCTTTATACTAGACATCGTCGGACAAATAGTTTTTCTCATAGACATTGTCGTGCTGTTCTTTGTTGCTTATAGAGACAGTCAGACTTACCGGATGGTCCATAAGCGCACCCCTATAGCTCTGCGGTATCTAAAATCTAGTTTTGTCTTTGATCTTCTCGGATGTTTACCTTGGGACATCATTTACAAGGCTTCTGGAAGAATAGAGGCAGTGAGATACCTTTTGTGGATCAGATTATATCGGGTGCGCAAAGTCACTGGATTTTTCCAGAGGATGGAGAAGGATATACGTATCAATTACTTGTTTACAAGgagtttaaaacttttggCCGTTGAACTGTATTGCACCCACACAGCAGCCTGCATCTTCTACTACTTGGCCACAACACTGCCACCTTCCCAAGAGGGATACACATGGATAGGAAGTTTGCAGTTGGGTGACTATAGTTACTCACAATTCAGGGAAATTGATTTCTGGAAACGCTACACAACATCGCTGTATTTTGCCATTGTTACTATGGCTACTGTTGGCTATGGAGATATACACGCTGTCAATATGAGGGAGATGATATTCATAATGATATATGCTTCTTTGGACATGGTTCTTGGTGCTTATTTGATTGGAAACATGACAGCATTGATAGTCAAAGGATCAAAGACTGAAAAGTTTAGGGACAAAATGACAGatcttttgaaatatataaatagaaacagACTTGGAAGGGACATCCGTGAACAAATAAAAGCCCATTTGCGCTTACGCTATGAGAGTAGCTACACTGAGGCAGCTGCAATTCAGGACATCCCCATTTCTATACGCGCCaagATATCCCAAACGTTATATTTGCCATACATTGAAAATGTTCCGCTCTTTAAGGGATGCAGTTCAGAATTCATCAATCAGATTGTTATTCGGCTACACGAAGAATTTTTTCTACCAGGGGAAGTGATACTGGAACAAGGAAATGCAGTAGATCAACTATACTTTGTTTGTCATGGTGTGCTGGAGAAAGTAGGCATATGTGAAGATGGATCTGAAGAAACTATTGCAGAACTACCACGCAACAGTTCATTTGGAGAGATATCAATTCTTTGCAACATTCCTCAGCCATATACTGTTAGGGTTTGTGAACTCTGCAGGCTTCTGCGGCTTGATAAACAATCATTCACAAATATCCTTGACATATACTTCTATGACGGGAGGAAAGTATTAAACAATCTTTTAGAGGGAAGAGAATCTTTTCGAGGGAAGCAATTAGAGTCCGACATCACATTTCATATTGGAAAGCAAGAAGCTGAACTTTCTTTAAAGGTTAACAGTGCAGCCTTTAATGGGGATCTATATCAGCTAAAAAGTTTGATTCGCGCTGGAGCTGATCCCAGCAAGACCGACTATGATGGAAGATCACCCTTGCATCTTGCTGCATCTAGAGGACATGAAGATATCACCCTTTTCCTCATTCAGGAAAAAGTAGATGTCAATATTACAGATAACTTCGGAAACACACCCTTACTTGAAGCTGTTAAGAATGGACATGACCGAGTTGCTTCCATACTTGTTCAAGAAGGGGCCTCAATGAAAATTGATGATGCTGGCAGTTTCCTATGTACAGCTGTTGCTAGGGGCGATTCAGATTATCTTCAAAGGCTTTTATCTAATGGCATGGATCCGAATTCTAAAGATTATGATTACCGAAGCCCTCTTCatgttgctgctgctgagGGCTTACTCTTCATGGCAAAGCTGCTACTAGAAGCTGGAGCTAGTGTTTTCACCAAAGATAGATGGGGAAACACCCCAATCGATGAAGCCCGGATGTCCGGAAATAAGAATCTCATTAGGCTACTAGAAGATGCAAAGTCAGCTCAGTTGTCAGAGTTCCCATATCCCTCCACACAATATACAGATAAAATGCACAGGAAGAAATGCACAGTGTTCCCTTTCCACCCATGGGATCCAAAAGAACATAGAAGACACGGAATTGTACTATGGGTTCCACTCACCGTTGAAGAACTTATAAATACAGCTACAAAGCAGCTAGAACTTTCTGGCAGCAGTTGTATTTTATCCGAGGATACTGGTCAAATTACTGATGTGGACATGATTAAGGATGATCAAAAGCTGTATCTAGTCCGCGAAACACGTTA 2525 0.4127 MVRKKSVKLVEKEEEDREKEKETPLSSPSQTTSSSDGREYEVEDLSDRLDSSRRSRFNLIENELTRRKFSSQAVLDGIRVFSSEDSVIHPDNRWYRAWVKFILLWAVYSSFFTPMEFGFFRGLPENLFILDIVGQIVFLIDIVVLFFVAYRDSQTYRMVHKRTPIALRYLKSSFVFDLLGCLPWDIIYKASGRIEAVRYLLWIRLYRVRKVTGFFQRMEKDIRINYLFTRSLKLLAVELYCTHTAACIFYYLATTLPPSQEGYTWIGSLQLGDYSYSQFREIDFWKRYTTSLYFAIVTMATVGYGDIHAVNMREMIFIMIYASLDMVLGAYLIGNMTALIVKGSKTEKFRDKMTDLLKYINRNRLGRDIREQIKAHLRLRYESSYTEAAAIQDIPISIRAKISQTLYLPYIENVPLFKGCSSEFINQIVIRLHEEFFLPGEVILEQGNAVDQLYFVCHGVLEKVGICEDGSEETIAELPRNSSFGEISILCNIPQPYTVRVCELCRLLRLDKQSFTNILDIYFYDGRKVLNNLLEGRESFRGKQLESDITFHIGKQEAELSLKVNSAAFNGDLYQLKSLIRAGADPSKTDYDGRSPLHLAASRGHEDITLFLIQEKVDVNITDNFGNTPLLEAVKNGHDRVASILVQEGASMKIDDAGSFLCTAVARGDSDYLQRLLSNGMDPNSKDYDYRSPLHVAAAEGLLFMAKLLLEAGASVFTKDRWGNTPIDEARMSGNKNLIRLLEDAKSAQLSEFPYPSTQYTDKMHRKKCTVFPFHPWDPKEHRRHGIVLWVPLTVEELINTATKQLELSGSSCILSEDTGQITDVDMIKDDQKLYLVRETR 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01348 841 PANTHER POTASSIUM CHANNEL SKOR-LIKE 33 840 - -
Bva13g01348 841 MobiDBLite consensus disorder prediction 1 47 - -
Bva13g01348 841 SUPERFAMILY Ankyrin repeat 564 744 IPR036770 -
Bva13g01348 841 SMART ANK_2a 656 685 IPR002110 GO:0005515
Bva13g01348 841 SMART ANK_2a 592 621 IPR002110 GO:0005515
Bva13g01348 841 SMART ANK_2a 625 654 IPR002110 GO:0005515
Bva13g01348 841 SMART ANK_2a 722 752 IPR002110 GO:0005515
Bva13g01348 841 SMART ANK_2a 689 718 IPR002110 GO:0005515
Bva13g01348 841 ProSiteProfiles Ankyrin repeat profile. 689 721 IPR002110 GO:0005515
Bva13g01348 841 ProSiteProfiles Ankyrin repeat profile. 592 624 IPR002110 GO:0005515
Bva13g01348 841 PRINTS EAG/ELK/ERG potassium channel family signature 240 250 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva13g01348 841 PRINTS EAG/ELK/ERG potassium channel family signature 288 305 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva13g01348 841 PRINTS EAG/ELK/ERG potassium channel family signature 332 341 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva13g01348 841 PRINTS EAG/ELK/ERG potassium channel family signature 131 141 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva13g01348 841 ProSiteProfiles cAMP/cGMP binding motif profile. 416 536 IPR000595 -
Bva13g01348 841 Pfam KHA, dimerisation domain of potassium ion channel 767 836 IPR021789 -
Bva13g01348 841 SUPERFAMILY Voltage-gated potassium channels 89 341 - -
Bva13g01348 841 ProSiteProfiles Ankyrin repeat profile. 625 657 IPR002110 GO:0005515
Bva13g01348 841 PANTHER POTASSIUM CHANNEL AKT1 33 840 IPR045319 GO:0005249|GO:0006813
Bva13g01348 841 SMART cnmp_10 416 534 IPR000595 -
Bva13g01348 841 ProSiteProfiles Ankyrin repeat region circular profile. 592 624 - -
Bva13g01348 841 CDD CAP_ED 416 530 IPR000595 -
Bva13g01348 841 PRINTS Ankyrin repeat signature 593 608 IPR002110 GO:0005515
Bva13g01348 841 PRINTS Ankyrin repeat signature 705 719 IPR002110 GO:0005515
Bva13g01348 841 Pfam Ion transport protein 96 341 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva13g01348 841 ProSiteProfiles Ankyrin repeat profile. 656 688 IPR002110 GO:0005515
Bva13g01348 841 ProSiteProfiles Ankyrin repeat region circular profile. 625 656 - -
Bva13g01348 841 SUPERFAMILY cAMP-binding domain-like 344 534 IPR018490 -
Bva13g01348 841 Pfam Ankyrin repeats (3 copies) 567 655 IPR002110 GO:0005515
Bva13g01348 841 Pfam Ankyrin repeats (3 copies) 662 743 IPR002110 GO:0005515
Bva13g01348 841 MobiDBLite consensus disorder prediction 1 24 - -
Bva13g01348 841 Gene3D - 98 342 - -
Bva13g01348 841 Gene3D Jelly Rolls 382 539 IPR014710 -
Bva13g01348 841 Gene3D - 658 752 IPR036770 -
Bva13g01348 841 ProSiteProfiles Ankyrin repeat region circular profile. 689 721 - -
Bva13g01348 841 Pfam Cyclic nucleotide-binding domain 436 520 IPR000595 -
Bva13g01348 841 ProSiteProfiles KHA domain profile. 768 841 IPR021789 -
Bva13g01348 841 Gene3D - 549 657 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01348 Bva-Chr13 7024328 7032509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01348 663 742 Ion Channels AT5G37500 33.333 2.22e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01348 K21867 - gmx:100814385 1375.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01348 13 7024328 7032509 Bva13g01348 13 7024328 7032509 ECH