Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01333 ATGGAGAAGATAATGGGAGAAGTCATTAGAGGCTTCACACTCTCACTCTTGATTGTCAATTGTCTCTTTTACCCTTCAGCTTCAGACTCCACAGATTCATTTCTCTTCGGCGGCTGCACCCAGCAAAAATACTCTCCCGATTCCCCCTACCAATCGAATCTCCATTCCCTCCTCACTTCCCTCGTCAACTCCGCCACCTACTCCTCCTACAACAACTACACCATCGTCGCCTCCACTCAAAGCGACGTCGTTTACGGCCTCTATCAATGCCGCGGCGACCTCGCCATTCCAGATTGCGCCACGTGTGTTGCTCGCGCAGTCACCAGAATCGGGTCCACGTGTTCCCAAACCTGTGGCGGGGCGGTGCAGCTGGAAGGGTGCTACGTCAAGTACGATAACGCTACCTTCTTGGGCGTGGAGGACAAGACCgtcattttgaaaaaatgtGGGCCCTCCGTGGGGTACAACCCGGATGCCATGAGCAGCAGGGATGCGGTTCTAGCCGGGTTGTCCGGTTCGGGTGGAGCGTTCCGGGGGGTTGGGTCGGGGAATGTCCAGGGTATGGCGCAGTGTGCGGGGGATCTCAGCTTTGTGGAGTGTCAGGATTGTATCTCGGAGGCCATCCGACGGTTGAGAAGCGATTGTGGTACTGCGGATTCCGGGGATATGTTCTTGGGCAAATGTTACGCCAGATACTCAACGGGTGGGGCCCATGCAGACTCCAAGGCCCATGATAAATCAAGTAATGAAGGCGAAAAGACATTTGCTATCATTGTTGGATTATTAGCAGGAGTAGCTTTACTAATTATTTTCCTGGTTTTTTTAAGGAGAGCTTTTGGAGGAgaaggtaaata 854 0.5164 MEKIMGEVIRGFTLSLLIVNCLFYPSASDSTDSFLFGGCTQQKYSPDSPYQSNLHSLLTSLVNSATYSSYNNYTIVASTQSDVVYGLYQCRGDLAIPDCATCVARAVTRIGSTCSQTCGGAVQLEGCYVKYDNATFLGVEDKTVILKKCGPSVGYNPDAMSSRDAVLAGLSGSGGAFRGVGSGNVQGMAQCAGDLSFVECQDCISEAIRRLRSDCGTADSGDMFLGKCYARYSTGGAHADSKAHDKSSNEGEKTFAIIVGLLAGVALLIIFLVFLRRAFGGEGK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01333 284 Pfam Salt stress response/antifungal 179 234 IPR002902 -
Bva13g01333 284 Pfam Salt stress response/antifungal 39 133 IPR002902 -
Bva13g01333 284 ProSiteProfiles Gnk2-homologous domain profile. 137 237 IPR002902 -
Bva13g01333 284 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 16 280 - -
Bva13g01333 284 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 16 280 - -
Bva13g01333 284 ProSiteProfiles Gnk2-homologous domain profile. 32 136 IPR002902 -
Bva13g01333 284 Gene3D - 158 235 IPR038408 -
Bva13g01333 284 Gene3D - 31 136 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01333 Bva-Chr13 6903262 6904462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01333 1 233 Pollen Coat Proteome AT4G20670 23.529 1.86e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01333 - - pop:18106627 405.986