Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01314 ATGAAGAGGAATCATGAAGATACACTCAGAGTTGGAGGTGTTAGTTCTGGGTATGGCGTTGGAGGAAGCCGGAACAGTGGCGGTGCTGATTTAAAAGGTGAATGCTCATCAATGTCAAGTGGGAAAGGTAAGATGTGGGTGGAGGAGCCTGAGGCCGGCGGCATGGATGAGTTGCTTGGGGCTTTGGGTTACAAGGTGAGGTCGTCGGACATGGCGGATGTGGCGCAGAAGCTTGAGCAGCTGGAGATGGTGATGGGCACTGCTCAGGAAGATGGAATTTCCCACCTTGCTTGTGACACCGTCCACTACGACCCAACCGATCTCTATGGCTGGGTTCAGAGCATGCTCACTGAGCTCAACAATTCTCCCAATGATCCAACGGAGCTGTTGGGGAGCAATCAAATTGATGGCCCTCTTCTAGCTCCGGCCGAATCCTCTTCCATACCCAATATTGATTTCGAAAATCAATCTCAGATTTTCAGCGATGATGATCTCCGAGCAATTCCAGGCATGGTGGCGTGCCCACAAACCGACCCAGACAGCGAAAACAGCCAGAAACGATTGAGGAGTTCCCCAATTGGATCAGATTCGATTCCAGCGTTACCTCCGTCACCGTCGGCGTCGAATGTATCAGAGTCGACTCGCCCTGTGGTTCTTGTTGACTCGCAAGAAGCCGGCGTCCGTCTCGTCCATACTCTCATGGCTTGTGCAGAAGCCGTTCAGCAGAACAATTTGAAGCTTGCAGACACGCTGGTGAAGCACGTGGGCATGCTCGCATCTTCTCAAGCCGGAGCAATGAGGAAGGTAGCAACCTACTTCGCCCAAGCTTTAGCTCGTCGAATTTACGGAATCTACCCTCAAGAAACCCTCGATTCATCTTTCTCCGATATGCTCCACATGCATTTCTACGAGTCCAGCCCCTACCTGAAATTTGCCCATTTCACTGCGAACCAAGCCATTCTCGAAGCGTTTTCTGGGGTGAACCGGGTCCACGTCATCGACTTCGGATTGAAGCAGGGGTTGCAATGGCCCGCTTTAATTCAAGCTCTCGCATTACGACCCGGTGGTCCACCGATTTTTCGTCTCACCGGAATCGGACCCCCACAACCCGATAACAGCGATGCCCTGCAACAAGTGGGTTGGAAATTGGCGCAATTGGCTGAAACTATTGGGGTCCAATTCGAATTCCGCGGATACGTTTGCACCAGTTTGGCGGATCTAGATCCAACCCATCTCGAAACCCGACCCGGCGAAGCTGTCGCTGTTAATTCCGTTTTCGAGCTCCACCGCATGTTGGCCAGACCCGGCGCGATCGAGAAGGTGCTGAACACGATCAAGGTAATCAAACCGCAGATTGTGACCATAGTGGAGCAAGAAGCAAACCACAACGGGCCGGTTTTCTTGGACCGGTTCACGGAGGCTTTGCATTACTACTCTAGCCTGTTTGACTCGCTCGAGGGATCGGCTGCAGGGTTAAGCTCGCCGAGCCAGGACCTGATCATGTCGGAACTGTACCTGGGGAGGCAGATATGCAACGTGGTGGCGTGCGAAGAGCGGGACCGAGTCGAGAGACACGAGGCGCTGGCTCAGTGGAAGACCCGGATGTGTTCGGCCGGGTTCGATCCGGTTCACTTGGGTTCAAACGCGTTCAAGCAAGCAAGCATGTTACTGGCTCTGTTCGCGGGTGGAGATGGGTACAGAGTGGAAGAGAGCAACGGGTGCCTGATGCTGGGTTGGCATACCCGCCCACTCATCGCTACCTCGGCTTGGAAAATTCCCGCCACTGAATA 1790 0.5369 MKRNHEDTLRVGGVSSGYGVGGSRNSGGADLKGECSSMSSGKGKMWVEEPEAGGMDELLGALGYKVRSSDMADVAQKLEQLEMVMGTAQEDGISHLACDTVHYDPTDLYGWVQSMLTELNNSPNDPTELLGSNQIDGPLLAPAESSSIPNIDFENQSQIFSDDDLRAIPGMVACPQTDPDSENSQKRLRSSPIGSDSIPALPPSPSASNVSESTRPVVLVDSQEAGVRLVHTLMACAEAVQQNNLKLADTLVKHVGMLASSQAGAMRKVATYFAQALARRIYGIYPQETLDSSFSDMLHMHFYESSPYLKFAHFTANQAILEAFSGVNRVHVIDFGLKQGLQWPALIQALALRPGGPPIFRLTGIGPPQPDNSDALQQVGWKLAQLAETIGVQFEFRGYVCTSLADLDPTHLETRPGEAVAVNSVFELHRMLARPGAIEKVLNTIKVIKPQIVTIVEQEANHNGPVFLDRFTEALHYYSSLFDSLEGSAAGLSSPSQDLIMSELYLGRQICNVVACEERDRVERHEALAQWKTRMCSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEESNGCLMLGWHTRPLIATSAWKIPATE 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01314 596 Coils Coil 71 91 - -
Bva13g01314 596 MobiDBLite consensus disorder prediction 170 214 - -
Bva13g01314 596 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 51 591 IPR005202 -
Bva13g01314 596 MobiDBLite consensus disorder prediction 1 42 - -
Bva13g01314 596 ProSiteProfiles GRAS family profile. 220 591 IPR005202 -
Bva13g01314 596 Pfam Transcriptional regulator DELLA protein N terminal 56 123 IPR021914 -
Bva13g01314 596 Gene3D - 54 119 IPR038088 -
Bva13g01314 596 PANTHER DELLA PROTEIN RGL1 51 591 IPR030006 GO:0003712|GO:0005634
Bva13g01314 596 SMART DELLA_2 56 129 - -
Bva13g01314 596 Pfam GRAS domain family 229 591 IPR005202 -
Bva13g01314 596 MobiDBLite consensus disorder prediction 177 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01314 Bva-Chr13 6759174 6761300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01314 45 592 GRAS Transcription Factor Family AT2G01570 62.304 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva13g01314 GRAS 3.6e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01314 K14494 - gmx:100799695 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01314 13 6759174 6761300 Bva13g01314 13 6759174 6761300 ECH