Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01305 ATGGGTTTCTCCAAAGGAACCTTCACTGACTCCAGGGAATCTCTCAATGCACCAAATGCTCCTCCATACGCTTCCTCTGTAGTTGCAGATCAGTATTGTGACTACAAGCAACTCAAATTCAGAAACATTTTGAGAAGAATGATTTGGGAGCTTGGTTTGGCCTGTTTTAGGCCATCTCGCAGTCTGCGAAGCTCAGGAAAAATTCAGGGGCAGGGCAAAACCGACGGTAACAGCCACAAGAAGACAAATTTAGAGCACAACAAAGCATGGCTGCTGGCGGAGTCTGGTGGGTGTGGGGCAGAATTGACAAATGCAGACCCTCAATCAGTGCACTCATCTTTCAGGTTTAGCTTCTGCTCTCAGGTTGAGCTGGAATCCTTGAACATAAGTTCTTCTGCAGCTGCAACTGTTTTGATGGTTAATTTGGACAATGGGGTTAGTGAATCTCGAGCCAGAGAGCTGAAATGGCGTAGAATCGAATCATTGGAGAAAAGTATATCTCCAGTGGCCAACACTTTGATCAGATTCAACTACTGTGAAATTCTATCTTCTACCCGCAATTTCTCAAAAGGCAGAGTTTTGGGAAGAGGGGCATTGAGCTGTGTTTTCAGAGGAAGAGTTGGGCTTTTGAGGACTGCAGTGGCAATTAAACGATTGGACAAGGAAGACAAGGAGTCTGCAAAAGCATTCTGCAGAGAACTGATGATTGCTAGTTCTCTTCATAACCCAAACATCGTTCCCCTTGTGGGTTTTTGTATTGACCCAGAAGAGGGCTTGTTTTTGGTCTACAAGTATGTCTCGGGAGGCAGCTTAGAGCGACACTTACATGGAAGGAGGAAGGGTGTGAAGGGTGGTTCACCACTTCCATGGTCTGTGAGGTATAAGGTTGCCATTGGAATTGCTGAAGCTGTGGCTTATCTGCATAATGGAACTGAAAGATGTGTTGTTCACAGAGATATTAAACCCTCAAACATTCTTCTTTCCTCTAAAAAGACTCCCAAGTTGTGTGATTTTGGCTTAGCTACATGGACTTCTGCACCCTCAGTTCCTTTCCTTTGCAAAACAGTCAAAGGAACATTTGGTTATTTGGCTCCAGAATATTTCCAACATGGGAAAATATCAGATAAAACTGATGTTTATGCTTTTGGTGTGGTTTTGTTGGAGCTCATAACCGGCCGGAAGCCAATTGAAGCAAAACGGCCACCAGGAGAGGAGAACTTGGTCTTATGGGCTAAACCATTGCTGCAGAAAGGGAAAGGAGCCATTGAAGAGCTGCTTGATCCTCATCTGGAGTGCAGTTTGAGATGCTCGAATCAGATGGCTCGGATAATCGAAGCTGCAGCTGCCTGTATTACCAATGAGGAATCTAGAAGACCCAGCATAAATGAGATCATTGCAATACTGAAAGGTGAAGAAGAACCAATCCTGTCTAGAAGGAAGAAATCTAATTTTCTGGGTAATGGATGTGTTATTGATTGCTACTCTCAATTACAACAAACAAATAGTGAGTTGAAAAGTCACTTGGCTTTAGCAATGTTAGGAGTTGCAGAGTTTGAAGAGGATGATTACCTTTATGACCGTTA 1583 0.4371 MGFSKGTFTDSRESLNAPNAPPYASSVVADQYCDYKQLKFRNILRRMIWELGLACFRPSRSLRSSGKIQGQGKTDGNSHKKTNLEHNKAWLLAESGGCGAELTNADPQSVHSSFRFSFCSQVELESLNISSSAAATVLMVNLDNGVSESRARELKWRRIESLEKSISPVANTLIRFNYCEILSSTRNFSKGRVLGRGALSCVFRGRVGLLRTAVAIKRLDKEDKESAKAFCRELMIASSLHNPNIVPLVGFCIDPEEGLFLVYKYVSGGSLERHLHGRRKGVKGGSPLPWSVRYKVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKTPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKISDKTDVYAFGVVLLELITGRKPIEAKRPPGEENLVLWAKPLLQKGKGAIEELLDPHLECSLRCSNQMARIIEAAAACITNEESRRPSINEIIAILKGEEEPILSRRKKSNFLGNGCVIDCYSQLQQTNSELKSHLALAMLGVAEFEEDDYLYDR 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01305 527 Pfam Protein kinase domain 189 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01305 527 Gene3D Transferase(Phosphotransferase) domain 1 266 484 - -
Bva13g01305 527 MobiDBLite consensus disorder prediction 1 20 - -
Bva13g01305 527 PANTHER OS01G0750732 PROTEIN 1 525 - -
Bva13g01305 527 ProSiteProfiles Protein kinase domain profile. 188 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01305 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 315 327 IPR008271 GO:0004672|GO:0006468
Bva13g01305 527 Gene3D Phosphorylase Kinase; domain 1 160 265 - -
Bva13g01305 527 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 1 525 - -
Bva13g01305 527 SMART serkin_6 188 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01305 527 SUPERFAMILY Protein kinase-like (PK-like) 176 473 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01305 Bva-Chr13 6708897 6711792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01305 174 471 Trihelix Transcription Factor Family AT1G70460 42.333 4.37e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bva13g01305 Pkinase 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01305 - - adu:107481060 875.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01305 13 6708897 6711792 Bva13g01305 13 6708897 6711792 ECH