Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01304 ATGGCAATTGCCAAAGACAGAATTCCCAATGACTTGAGCAGCAAGGTTCAAGCTTATGTCTTCAATGAATACCACAAATCTGTgcctgaagatgaagatgggTCACAAAGCATTAATGGGTTCGGCACTGATTCAGCCATAACCCATTCTTCGATCAATTTCAGGGCCAGTGGTTGTTACTACAATCTCATGCATGCTAATGAATCTTTGATGAGCTTTCAGCAGATCAGCAATGGTTACAATCACTGGAATCAGGCTAGTCCTAAAGGAAACATGGAACCTCGCTTGGTTCAAGATATCAATTGCCTTCAAATGGGGAGTGGCTATAGCACCGTGGCCAACAATGGTGAAAGTTCAGGAGAAGAAGCAGTAGTCTCCATTAAGCGTTCTTCTGAGGGAGAGAGTCTGCAAGCTGAAAAGAAGCAATGCTCTAGTAGTATTTCTGCCACCAAAAAGCCAAAACCAAAGTCAAAACCATCTAAGGACCCACAGAGTATTGCAGCCAAGAACAGAAGGGAGAGGATAAGCGAGCGGCTTAAGATACTACAAGAACTGGTGCCTAATGGCTCCAAGGTTGATTTGGTTACCATGTTGGAGAAAGCCATTAGCTATGTAAAATTTCTTCAGTTGCAAGTGAAGGTGTTGGCAACTGATGAATTCTGGCCTATTCAAGGTGGAAGGGCTCCTGATATATCTCAAGTCAGAGAAGCCATTGATGCTATTCTTTCTTCCCAGAAGGACACAAGTTCAATCTCAAAATA 761 0.4179 MAIAKDRIPNDLSSKVQAYVFNEYHKSVPEDEDGSQSINGFGTDSAITHSSINFRASGCYYNLMHANESLMSFQQISNGYNHWNQASPKGNMEPRLVQDINCLQMGSGYSTVANNGESSGEEAVVSIKRSSEGESLQAEKKQCSSSISATKKPKPKSKPSKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPIQGGRAPDISQVREAIDAILSSQKDTSSISK 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01304 253 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 19 244 - -
Bva13g01304 253 SMART finulus 165 214 IPR011598 GO:0046983
Bva13g01304 253 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 217 IPR036638 GO:0046983
Bva13g01304 253 Pfam Helix-loop-helix DNA-binding domain 166 209 IPR011598 GO:0046983
Bva13g01304 253 CDD bHLH_AtIND_like 162 222 - -
Bva13g01304 253 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 19 244 - -
Bva13g01304 253 Gene3D - 154 216 IPR036638 GO:0046983
Bva13g01304 253 MobiDBLite consensus disorder prediction 137 153 - -
Bva13g01304 253 MobiDBLite consensus disorder prediction 155 171 - -
Bva13g01304 253 MobiDBLite consensus disorder prediction 123 171 - -
Bva13g01304 253 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 159 208 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01304 Bva-Chr13 6688780 6690073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01304 17 250 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 50.410 3.50e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva13g01304 HLH 6.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01304 - - gmx:100810010 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01304 13 6688780 6690073 Bva13g01304 13 6688780 6690073 ECH