Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01295 ATGGGTTGCTGCTTCAGTGCTAGGATCAAAGCAGAGAGTCCTCCGCGTAATGGCTCGACTTCAAATTATGTTAGCAAAGACGAGGATACTTTGAGTGGTTTAAGCAGCAAGGTCTCCCTTACCTCTGTGCCTCAAACTCCACGGACAGAGGGTGAGATCTTGCAGTCTGAAAATTTGAACAGCTTCAGCTTTAATGAGCTTAAAACAGCCACAAGGAACTTCCGGCCAGATAGTGTGGTTGGTGAAGGTGGCTTTGGATCTGTCTTCAAGGGGTGGATCGATGAGCAGACATTGACTGCTGCTAAACCTGGGACTGGAACTGTCATTGCCGCGAAGAGGCTTAATCAAGAAGGCTTCCAGGGACACAATGAATGGTTGGCAGAAATCAATTACCTGGGGCAGCTGCATCATCCCAATCTAGTGAAACTGTTTGGTTACTGCTTAGAGGATGACCACCGGCTATTGGTGTATGAATTTCTGCCAAAGGGTAGCTTGGATAACCATTTATTTAGGAGAGCTTCTTACTTTCAGCCACTTTCTTGGGGTATCCGTATGAAGGTTGCCCTTGATGCTGCTAAGGGTCTTGCATTTCTTCACAGTGATGAAGCTAAAGTGATATATCGAGACTTCAAGACATCTAATATTTTGCTTGATTCGAACTATAATGCAAAACTCTCTGATTTTGGGTTGGCAAAGGATGGACCAGTAGGTGATAAGAGCCATGTCTCTACAAGGGTAATGGGCACCTATGGCTATGCCGCTCCTGAGTACATGGCCACAGGTCACTTGACCAAGAAGAGTGATGTCTACAGCTTCGGTGTTGTACTCCTGGAAATTATGTCTGGCAAGCGTGCCATGGACAAAAACAGACCATCTGGAGAACACAATTTGGTTGAATGGGCCAAGCCATATCTTACCAGCAAACGCAGAATCTTCCAAGTTATGGATGCTCGAATTGAAGGCCAATACTCATTGCGTGCAGCAATGAAAGTAGCTAACCTTGCAATTCAATGCCTTTCTGTAGAACCCAGATTCAGACCAACGATGGAAGAGGTGGTAAGAACATTGGAACAGCTTCAGGATTCCAATGACTCAGGCTCAGTGGGAAGCTCTCGAGATCAAACAGTGAGAAAGAGTCACCATAGCTCGAGCTCACGCTCAAGGTCTAGCTCTGGTGCTAGACCCCATAGAAGAAGTATGAATAATTCTTTAAATGGAGAAGGTACTTCTAATCCAAAGCCATCTGCTTCTCCTCTTGTTACTTG 1265 0.4553 MGCCFSARIKAESPPRNGSTSNYVSKDEDTLSGLSSKVSLTSVPQTPRTEGEILQSENLNSFSFNELKTATRNFRPDSVVGEGGFGSVFKGWIDEQTLTAAKPGTGTVIAAKRLNQEGFQGHNEWLAEINYLGQLHHPNLVKLFGYCLEDDHRLLVYEFLPKGSLDNHLFRRASYFQPLSWGIRMKVALDAAKGLAFLHSDEAKVIYRDFKTSNILLDSNYNAKLSDFGLAKDGPVGDKSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSFGVVLLEIMSGKRAMDKNRPSGEHNLVEWAKPYLTSKRRIFQVMDARIEGQYSLRAAMKVANLAIQCLSVEPRFRPTMEEVVRTLEQLQDSNDSGSVGSSRDQTVRKSHHSSSSRSRSSSGARPHRRSMNNSLNGEGTSNPKPSASPLVT 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01295 421 MobiDBLite consensus disorder prediction 385 421 - -
Bva13g01295 421 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Bva13g01295 421 PANTHER KINASE 1B 24 390 - -
Bva13g01295 421 Gene3D Transferase(Phosphotransferase) domain 1 160 384 - -
Bva13g01295 421 MobiDBLite consensus disorder prediction 357 373 - -
Bva13g01295 421 PANTHER OS01G0588500 PROTEIN-RELATED 24 390 - -
Bva13g01295 421 CDD STKc_IRAK 80 359 - -
Bva13g01295 421 Pfam Protein tyrosine and serine/threonine kinase 78 356 IPR001245 GO:0004672|GO:0006468
Bva13g01295 421 MobiDBLite consensus disorder prediction 357 421 - -
Bva13g01295 421 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Bva13g01295 421 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01295 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Bva13g01295 421 SUPERFAMILY Protein kinase-like (PK-like) 52 358 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01295 Bva-Chr13 6628826 6632163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01295 44 381 Glycoside Hydrolase AT3G07070 46.000 1.73e-105 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva13g01295 PK_Tyr_Ser-Thr 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01295 - - gmx:100775335 648.277