Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01286 ATGCAAGAATCCTTCATTGCGTTTCCGTTGGATAGCTTAACTGCATGGCAGAAGGGAGTGAGCGGTGTCGAATCGAAATTTGAATACCAGATCAAGATCGGGTGCGACAAAGTAACTGTTTCTGGGCGGTTTCTTCTCATCGGCGGCGGCGCTGCTTCGGTAACAGGGCTTCCTCCTAGGAGGCGGCGGGCACGTCGTCTGTTCCGGAATCCGGCTACCGCTGTGTCTCGGCGTGGTAAACTACCTAATTTCCAGCAGaaggataaaattttcatggagAAAAGGTCGTGCATATGCATTAGAATTCTTGACTTTGGATTTCACCGATTAGGTGCAAATGGATCGAAGATTGATCATCCTGTCCTGATTACAGAGTGTGTATGCAACCCAGTTCAGTCTCGAAGTAAAATGGGAGAACTTCTTTTTGAGACTTATGGAGTTCCATCAGTAGCCTTTGGTGTTGATGCAGCATTCAGCTATAAGGACAATAAACTACAGGAGTTTGTGATAAAGATAGTCCTGTTGTCTGTCCTGGATTTTAAGGCAACCCATGTGATTCAGTTTGTAGGTAGGGAGCCAATGTATAATGGAAGTTGCCGCAGTAATATTGGAGGATTCCATGTTACTGATTGCTTAAAGGAACTTCTTTCACTCAAATATCCTTATCATTCGTG 674 0.4392 MQESFIAFPLDSLTAWQKGVSGVESKFEYQIKIGCDKVTVSGRFLLIGGGAASVTGLPPRRRRARRLFRNPATAVSRRGKLPNFQQKDKIFMEKRSCICIRIDHPVLITECVCNPVQSRSKMGELLFETYGVPSVAFGVDAAFSYKDNKLQEFVIKIVLLSVLDFKATHVIQFVGREPMYNGSCRSNIGGFHVTDCLKELLSLKYPYHS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01286 209 Gene3D - 139 193 - -
Bva13g01286 209 Gene3D - 99 137 - -
Bva13g01286 209 SUPERFAMILY Actin-like ATPase domain 100 148 IPR043129 -
Bva13g01286 209 PANTHER ACTIN-RELATED PROTEIN 5 100 202 IPR027664 -
Bva13g01286 209 Pfam Actin 102 203 IPR004000 -
Bva13g01286 209 Gene3D Actin; Chain A, domain 4 194 203 - -
Bva13g01286 209 PANTHER ACTIN 100 202 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01286 Bva-Chr13 6568050 6571651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01286 103 202 Cytoskeleton Gene Families AT5G09810 29.703 4.87e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01286 K11672 - gmx:100808396 164.466