Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01274 ATGAAATTCTTCAAACGCTTTCACATCAAGTTCGTCGCTTTATCATATCTGGTTGCACTTGGCACATCCTCTGCCTCAATTCATTTTGTCAATTCTGTCATGGCAAAGACACTCTTACTTTTCtgggtttttcttttggcttcaAACCCAGTAAAATCTCAGCTAGACGAGCTGTTCTTCCATGGGTTTGCCGGCGCCGGCACCAACATGAGCTTAAACGGAGGTGCAGAGATAGAGCACAATGGCATACTTCGTCTCACAAACGACACGCTTAGAGTGATTGGGCATGCGTTTTATTCACCTCCAGTCCAATTCAAGAACTCCACAGATGGTAAAGTTTCCTCCTTTTCAactgcttttgcttttgctataATCCCAGAATACCCAAAGCTTGGTGGCCATGGCTTCGCTTTTACCATTTCTCGTTCCAAAGAGCTTCCCGGTGCGCTTCCCAGCCAGTACCTTGGCCTTCTTAATGCGAGCGATGTTGGGAATTTCTCGAACCATCTGTTTGCTGTGGAGTTCGACACTGTCCAAGACTTCGAATTCGGAGACATCAATGATAACCATGTTGGTGTCAACCTTAATAACTTAGGATCAAACAAATCTGTTCCTGCTGCTTATTTTACAGATGGCTCAACAAAGCAAGAGCTTAATTTGAAGAGTGGGAAGGTGATTCAGGCATGGATTGACTATGATTCCAACAAGAATGAATTGAATATCAGGCTTTCTCCAGATTCTGCAAAACCCACTTTGCCAATTTTGTCCTTTCAAGTTGATCTGTCACCAATTCTTAAAGAGTCTATGTATGTtgggttttcttcttcaactggGTTGCTTGCAAGCAGGCACTATCTTCTGGGTTGGAGCTTCAAAATAAATGGAGAGGCAAAATCTCTATATCTGGAAACGCTTCCTTCTCTGCCTGGGCCCAAGAAGAGTAAGACTCCATTGATACTGGGATTCACCGTTGGTGTTGTTTTTCTAGTAATTCTGGCAATTGGGTTAGCATTTTATGTCATCAGACAGATAAAGAATGGTGATCTTGTTGAAGCTTGGGAGCTCGAAGTACGTCCCCACAGATTTTCATACCATGAGCTGAAGCAAGCTACGAAGGGCTTCAAGGACAAACAGCTTCTCGGGTTTGGTGGGTTTGGTCGAGTTTACAAAGGGGTGCTGCCAAATTCCATCACCCAAGTCGCTGTTAAGCGAATTTCCCATGGATCAAAACAAGGGCTTCGAGAATTCGTGTCAGAAATTGCAACCATTGGTCGGCTTCGTCACAGAAACCTGGTACAGTTACTAGGTTGGTGTCGTAGACTAGGGGATCTACTGCTTGTGTATGATTTCATGCCCAATGGGAGCTTGGACAAGTACCTCTTCGATAAACCCAGAGAAATTTTGAGCTGGGAACAGAGGTTCAAGATCATAAAGGGGGTAGCTTCGGGTCTTGTCTATCTGCATGAAGAATGGGAACAAAGTGTGCTTCATAGAGACATAAAAGCAGGGAATGTTCTGTTAGATTCAGAAATGAATGGTAGGCTTGGCGATTTTGGTTTAGCTAAGCTTTATGAGCACGGGACAAATCCAAGCACTACACGGGTTGTGGGCACGCTGGGTTACTTGGCCCCGGAGCTGACACGCACCGGAAAACCCACCACTAGCTCTGACGTTTTTGCATTCGGTGCTCTCTTGCTAGAAGTGGTGTGTGGAAGAAGACCCATTGAGCCGAAGGCATTGCCGGAGGAGCTCATATTGGTGGACTGGGTTTGGGATCTGTGGCGGGTCGGGGCAATATTGAACGCGGTGGATCCGAAATTGGGTCACCAATTTGATGAGCTACAAGCTCTGTTGGTGCTCAAATTGGGTTTGATGTGTTCGAATAATGCGCCTGAAGCACGACCTAGTATGAGGCAAGTCGTGAGTTACTTGAAGGGAGAGCAGCCGGTACCGGAGGTAGTGCCGGCGCCGGATGAATTTGATGGGAAAAAGGGGGGAGGAGCTGGCGGCAGCGGCGGTGAATTTGTGGATTTTGTGCATTCATATCCGAGGTCGTCATATTTTGATAAGGCGAGTACGTGTTCGTCGGCCGGCGACGAGAGGGAGGCTGACGTGGAGGCTGGCTCTGCTACGCTTCTTTCCTCTTCGAGTAGACCGGAGGAAGGTAGATA 2171 0.4565 MKFFKRFHIKFVALSYLVALGTSSASIHFVNSVMAKTLLLFWVFLLASNPVKSQLDELFFHGFAGAGTNMSLNGGAEIEHNGILRLTNDTLRVIGHAFYSPPVQFKNSTDGKVSSFSTAFAFAIIPEYPKLGGHGFAFTISRSKELPGALPSQYLGLLNASDVGNFSNHLFAVEFDTVQDFEFGDINDNHVGVNLNNLGSNKSVPAAYFTDGSTKQELNLKSGKVIQAWIDYDSNKNELNIRLSPDSAKPTLPILSFQVDLSPILKESMYVGFSSSTGLLASRHYLLGWSFKINGEAKSLYLETLPSLPGPKKSKTPLILGFTVGVVFLVILAIGLAFYVIRQIKNGDLVEAWELEVRPHRFSYHELKQATKGFKDKQLLGFGGFGRVYKGVLPNSITQVAVKRISHGSKQGLREFVSEIATIGRLRHRNLVQLLGWCRRLGDLLLVYDFMPNGSLDKYLFDKPREILSWEQRFKIIKGVASGLVYLHEEWEQSVLHRDIKAGNVLLDSEMNGRLGDFGLAKLYEHGTNPSTTRVVGTLGYLAPELTRTGKPTTSSDVFAFGALLLEVVCGRRPIEPKALPEELILVDWVWDLWRVGAILNAVDPKLGHQFDELQALLVLKLGLMCSNNAPEARPSMRQVVSYLKGEQPVPEVVPAPDEFDGKKGGGAGGSGGEFVDFVHSYPRSSYFDKASTCSSAGDEREADVEAGSATLLSSSSRPEEGR 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01274 723 CDD lectin_legume_LecRK_Arcelin_ConA 60 295 IPR001220 GO:0030246
Bva13g01274 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Bva13g01274 723 SMART serkin_6 374 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01274 723 MobiDBLite consensus disorder prediction 688 723 - -
Bva13g01274 723 Pfam Legume lectin domain 59 300 IPR001220 GO:0030246
Bva13g01274 723 PANTHER - 36 716 - -
Bva13g01274 723 Gene3D Transferase(Phosphotransferase) domain 1 451 656 - -
Bva13g01274 723 SUPERFAMILY Protein kinase-like (PK-like) 356 655 IPR011009 -
Bva13g01274 723 ProSitePatterns Protein kinases ATP-binding region signature. 380 403 IPR017441 GO:0005524
Bva13g01274 723 Gene3D Phosphorylase Kinase; domain 1 359 450 - -
Bva13g01274 723 ProSiteProfiles Protein kinase domain profile. 374 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01274 723 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 36 716 - -
Bva13g01274 723 Gene3D - 57 294 - -
Bva13g01274 723 SUPERFAMILY Concanavalin A-like lectins/glucanases 59 311 IPR013320 -
Bva13g01274 723 MobiDBLite consensus disorder prediction 709 723 - -
Bva13g01274 723 CDD STKc_IRAK 380 646 - -
Bva13g01274 723 Pfam Protein kinase domain 374 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01274 Bva-Chr13 6459725 6463256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01274 51 681 Receptor kinase-like Gene Family AT3G55550 62.500 0.0 806
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva13g01274 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01274 - - jre:108986380 1011.52