Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01266 atggaaaaagaatctCAGTACTTGATGTGGGTAAAGAGAAAACAACTGAAGTCAAATCTTCAAGTACCAGTTAATGGAGGCTACCACAACAACTCATCGTGGGAAGAAAGAGCTTTTGCAGAAGATGCAGCTAGGATACTTGGTGGGTGCATGTGGCCTCCAAGATCTTACTCTTGCAGCTTCTGTAAAAGGGAATTCAGGTCTGCTCAAGCTCTGGGAGGCCACATGAATGTCCACAGAAGGGATAGAGCCAGGCTTAAAGAAAGCTTCGGCCCCCGTAATGAAAGTACTCAATTTTCTGCAGAGATCTGCTCCCAGAAGCTAGACTCTTGTCTTAATCCTAATTCTGCTTCTGCTCTTTCAGCTTTATCCAGACATGAAATTTGTGGTCTGCAAATTGTTTCTTCTCATTCTTCTACCACTAGCTGGGGACAACACAAGGGCCCTCCCTGTACTTTAAAGTCAGATTCTGTTGGAGGGAAACTCATGTGCATATCAGATTCAGAAAGATCAGAAGAAGATTTTAAAGGCTTGGCTTGTAATAATGATGTTGAAACAAATCTGTCTGTGGGAATGAGTTGGCTGTTTGGCCCAAAATTTCCAAGTGGGTCATGTGGGGATGAAGCTATGATTAGTTGTAAAAGAGCCAAGACTGCTGTTTCTTCACTACCTGTCTTCCTCAAGCCTGGTATGGAAGACTTGGATCTTGAACTCAGGCTAGGGAAAACACAGAAAGTTAAGTA 743 0.4253 MEKESQYLMWVKRKQLKSNLQVPVNGGYHNNSSWEERAFAEDAARILGGCMWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKESFGPRNESTQFSAEICSQKLDSCLNPNSASALSALSRHEICGLQIVSSHSSTTSWGQHKGPPCTLKSDSVGGKLMCISDSERSEEDFKGLACNNDVETNLSVGMSWLFGPKFPSGSCGDEAMISCKRAKTAVSSLPVFLKPGMEDLDLELRLGKTQKVK 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01266 247 Gene3D Classic Zinc Finger 53 110 - -
Bva13g01266 247 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 246 - -
Bva13g01266 247 Pfam C2H2-type zinc finger 57 81 - -
Bva13g01266 247 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Bva13g01266 247 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 84 IPR013087 -
Bva13g01266 247 PANTHER OS07G0101800 PROTEIN 1 246 - -
Bva13g01266 247 SMART c2h2final6 57 79 IPR013087 -
Bva13g01266 247 SUPERFAMILY beta-beta-alpha zinc fingers 54 83 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01266 Bva-Chr13 6410237 6410980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01266 35 241 C2H2 Transcription Factor Family AT5G06070 39.269 6.97e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva13g01266 zf-C2H2_6 1.1e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01266 - - aprc:113851273 241.121