Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01263 ATGGCTGGAATCTGCTGTGGGGTTGTTGGAGAAGGTGAAACGCCGACTCCGGTTGAACCTTGCTCAGGGTCTTCTCGGCGCCGGAGGTTGGATTTCCTACCGCTAAAGTATGTGGCCGACGCGTCGATGCCTCCATCGGCATCGGAGAATAATAGCCGAAAGCGCCAGAAGCGTGTGGATCTCTATGCTGCTCGAACACAACCCTGGGAGTGCAAAAACACAAGTGAGTGTTGTGAGCCGAACGGTAATAAACCTGAGGACGAACAAGATAAAGAACCTAAGCTTCAGAATCAACCTGCTATTTCTGTCTTAAATTCAACGGAGGTGGGAAATGAGGCTGTTCGGGAATACCCAAAATATGGTGTGACATCGGTTTGTGGTCGGAGGAGGGATATGGAAGACGCTGTTTCAGTTCATCCATCGTTCTCGCAAGAACAGGGACAAGACCAGAACGGCCTTCATTTCTTCGGTGTATTCGACGGCCATGGCTGCTCTCATGTGGCAACCATGTGTAAAGATAGGCTACACGAGATTGTGAAGGAAGAGCTCGAAGGAGCTCGAGAAAATCTTGAATGGAAGTCCCTGATGGAGCACAGTTTTGGTCGCATGGACGAGGAGGTACAGAACTGGACACAGACTAACAACAACCAGAACGCCACGTGTAGGTGCGAGCTTCAAACTCCCCACTGCGGCGCCGTTGGGTCTACGGCTGTGGCCGCCGTCGTAACGCCGGACAAGATCATCGTCTCCAACTGTGGCGATTCCCGTGCCGTCCTCTGCCGAAACGGCGTCGCAATCCCTCTCTCCTCCGATCACAAGCCCGACCGACCAGATGAACTGCTCCGAGTCCAAGCCGCCGGAGGGCGCGTGATATATTGGGATGGTCCTAGAGTTCTCGGAGTGCTGGCCATGTCGAGAGCCATAGGTGACAATTACCTAAAACCATACGTGATTTCAGAACCTGAAGTAACGGTAACGGAACGGACGGACGAGGATGAGTGTCTGATTCTGGCAAGCGACGGACTTTGGGACGTAGTGTCAAACGACATCGCATGCGGGGTGGTGAGGATGTGTCTGAGGGCCCAGAGGCCGCCGTCGCCAGCGGGGTCGCTGGGGAGCGAGATGGCGGTGGGAGCAGCCGCAGACGGGTCAGACAAGGCGTGCTCCGACGCGTCCATTCTGCTGACGAAGTTGGCGCTGGCAAGACATAGTACGGACAACGTGAGCGTGGTGGTGGTTGATTTGAGGAGAGATCAACGAGAATCCAAGCATcaatg 1277 0.5442 MAGICCGVVGEGETPTPVEPCSGSSRRRRLDFLPLKYVADASMPPSASENNSRKRQKRVDLYAARTQPWECKNTSECCEPNGNKPEDEQDKEPKLQNQPAISVLNSTEVGNEAVREYPKYGVTSVCGRRRDMEDAVSVHPSFSQEQGQDQNGLHFFGVFDGHGCSHVATMCKDRLHEIVKEELEGARENLEWKSLMEHSFGRMDEEVQNWTQTNNNQNATCRCELQTPHCGAVGSTAVAAVVTPDKIIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTDEDECLILASDGLWDVVSNDIACGVVRMCLRAQRPPSPAGSLGSEMAVGAAADGSDKACSDASILLTKLALARHSTDNVSVVVVDLRRDQRESKHQ 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01263 425 MobiDBLite consensus disorder prediction 75 99 - -
Bva13g01263 425 Gene3D - 114 424 IPR036457 -
Bva13g01263 425 ProSiteProfiles PPM-type phosphatase domain profile. 119 415 IPR001932 -
Bva13g01263 425 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 29 420 - -
Bva13g01263 425 ProSitePatterns PPM-type phosphatase domain signature. 155 163 IPR000222 GO:0043169
Bva13g01263 425 SMART PP2C_4 107 413 IPR001932 -
Bva13g01263 425 Pfam Protein phosphatase 2C 119 406 IPR001932 -
Bva13g01263 425 SMART PP2C_SIG_2 131 415 IPR001932 -
Bva13g01263 425 CDD PP2Cc 119 415 IPR001932 -
Bva13g01263 425 PANTHER ALPHABET, ISOFORM E-RELATED 29 420 - -
Bva13g01263 425 MobiDBLite consensus disorder prediction 40 59 - -
Bva13g01263 425 SUPERFAMILY PP2C-like 117 416 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01263 Bva-Chr13 6394410 6396559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01263 1 390 PP2C-type Phosphatase Gene Family AT3G11410 57.431 1.62e-146 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01263 K14497 - gmx:100776356 554.673