Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01254 ATGAAGGCACTCATTCTGGTTGGAGGGTTTGGAACACGTTTGAGGCCATTGACACTCAGTGTCCCAAAGCCTCTTGTTGATTTTGCTAACAAACCCATGATTCTTCATCAGATAGAGGCCCTTAAGTCTATTGGAGTAACTGAAGTGGTATTGGCTATCAATTACCAACCAGAGGTAATGTTGAATTTCTTGAAGGAATTTGAGGCAAAACTTGGCATTAAGATCACCTGTTCCCAAGAAACTGAACCACTAGGGACTGCTGGTCCCCTGGCACTTGCTAGGGACAAGCTTCTAGACAAATCAGGAGAGccattttttgttcttaacaGTGACGTCATCAGTGAGTACCCACTTAAAGAAATGATTGAATTCCATAAAGCACACGGAGGAGAGGCTTCCATAATGGTGACAAAGGTCGACGAACCATCAAAATATGGCGTGGTTGTTATGGAAGAGAAGACAGGGTTGGTTGATAAATTTGTGGAAAAACCAAAGTTGTTTGTTGGCAACAAAATCAATGCTGGAATCTACCTCTTGAATCCCTCAGTTTTAGATCGAATTGAACTGAAACCCACATCTATTGAGAAGGAGGTTTTTCCAAAGATTGCAGCAGAGAAAAAGCTATATGCAATGGTCCTGCCAGGATTTTGGATGGACATTGGACAACCAAGGGATTATATAACAGGCCTGAGACTCTATCTAGACTCGCTGAAGAAAAAATCTTCTTCGAAGTTGGCCAGTGGTCCTAACATTGTGGGGAATGTAATTGTGGATGAGACTGCCAAAATTGGCGAGGGATGTCTCATTGGACCTAATGTTGCAATCGGCCCTGGTTGCGTTGTTGAGGCAGGAGTTAGGCTCTCACGCTGCACCGTAATGCGAGGAGTCCGGATTAAGAAACATGCCTGCATATCCAGCAGTATCATCGGCTGGCATTCGACCGTCGGGCAATGGGCTCGTGTGGAGAACATGACCATTCTGGGAGAAGATGTCCACGTGTGTGATGAAATTTACAGCAATGGTGGCGTTGTTTTGCCCCACAAGGAGATCAAGTCAAGCATTTTGAAGCCAGAGATAGTTATGTA 1085 0.4396 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKSIGVTEVVLAINYQPEVMLNFLKEFEAKLGIKITCSQETEPLGTAGPLALARDKLLDKSGEPFFVLNSDVISEYPLKEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEEKTGLVDKFVEKPKLFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPKIAAEKKLYAMVLPGFWMDIGQPRDYITGLRLYLDSLKKKSSSKLASGPNIVGNVIVDETAKIGEGCLIGPNVAIGPGCVVEAGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01254 361 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 361 - -
Bva13g01254 361 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 233 IPR029044 -
Bva13g01254 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 312 IPR029044 -
Bva13g01254 361 Pfam Bacterial transferase hexapeptide (six repeats) 261 295 IPR001451 -
Bva13g01254 361 Pfam Nucleotidyl transferase 2 229 IPR005835 GO:0009058|GO:0016779
Bva13g01254 361 Gene3D Hexapeptide repeat proteins 235 356 - -
Bva13g01254 361 CDD M1P_guanylylT_B_like_N 1 234 IPR045233 GO:0004475|GO:0005525|GO:0009298
Bva13g01254 361 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE FAMILY PROTEIN-RELATED 1 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01254 Bva-Chr13 6351979 6356468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01254 1 147 Eukaryotic Initiation Factors Gene Family AT4G18300 24.516 2.53e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01254 K00966 - vvi:100233006 669.077