Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01246 ATGAGCACACAAGTGCAAGGTGGGGTTGACCCTGTCGTACTCGATGACATAATCAGACGGCTCACTGAAGTCCGATTGGCCCGACCCGGCAAGCAGGTTCAGCTCTCTGAGACCGAGATCAAGCAGCTTTGTGTTACATCCAGAGAGATTTTTCTTCAGCAGCCCAATTTGCTTGAACTCGAAGCCCCCATCAAAATTTGTGGTGACATTCATGGGCAGTACAGTGACTTATTGAGGCTTTTTGAATATGGTGGTTTCCCTCCAGATACCAATTATCTCTTTTTGGGAGACTATGTGGATCGTGGGAAGCAGAGCTTAGAGACTATATGCCTTTTGCTTGcctataaaatcaaatatcctgagaactttttccttttgaggGGAAACCATGAATGTGCTTCCATTAATAGGATATATGGATTTTATGATGAATGTAAGCGACGGTTTAATGTGAGGCTTTGGAAAGCCTTTACAGAATGTTTCAATTGCCTTCCTGTGGCAGCCCTTATTGATGACAAGATATTGTGCATGCATGGTGGTCTTTCCCCTGACCTCGCAAGCTTGGATCAAATTAGAAATCTACCTCGTCCAACTGTTGTTCCAGACACTGGCTTGCTTTGTGATTTGCTTTGGTCAGATCCTGGTAGAGATGTAAAGGGATGGGGCATGAATGACAGAGGAGTCTCGTATACATTTGGCCCTGATAAGGTGGCTGAATTTTTGACCAAGCATGACTTGGATCTTGTCTGTCGTGCTCATCAGGTTGTAGAGGATGGGTATGAATTCTTTGCTGACCGGCAACTTGTTACAATATTTTCTGCTCCAAACTATTGTGGTGAATTTGACAATGCTGGTGCCATGATGAGTGTGGATGAAAACTTGATGTGCTCATTCCAGATTCTTAAGCCTGCAGAGAAAAGACCGAAGCTTGTGatgtcaaacaaaatata 950 0.42 MSTQVQGGVDPVVLDDIIRRLTEVRLARPGKQVQLSETEIKQLCVTSREIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPDTNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTECFNCLPVAALIDDKILCMHGGLSPDLASLDQIRNLPRPTVVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVAEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKRPKLVMSNKI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01246 316 ProSitePatterns Serine/threonine specific protein phosphatases signature. 126 131 IPR006186 GO:0016787
Bva13g01246 316 SUPERFAMILY Metallo-dependent phosphatases 21 310 IPR029052 -
Bva13g01246 316 Gene3D - 8 314 IPR029052 -
Bva13g01246 316 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 309 - -
Bva13g01246 316 PRINTS Serine/threonine phosphatase family signature 125 149 IPR006186 GO:0016787
Bva13g01246 316 PRINTS Serine/threonine phosphatase family signature 267 283 IPR006186 GO:0016787
Bva13g01246 316 PRINTS Serine/threonine phosphatase family signature 188 215 IPR006186 GO:0016787
Bva13g01246 316 PRINTS Serine/threonine phosphatase family signature 92 119 IPR006186 GO:0016787
Bva13g01246 316 PRINTS Serine/threonine phosphatase family signature 159 185 IPR006186 GO:0016787
Bva13g01246 316 PRINTS Serine/threonine phosphatase family signature 63 90 IPR006186 GO:0016787
Bva13g01246 316 PRINTS Serine/threonine phosphatase family signature 245 265 IPR006186 GO:0016787
Bva13g01246 316 Pfam Serine-threonine protein phosphatase N-terminal domain 14 61 IPR031675 -
Bva13g01246 316 SMART pp2a_7 35 305 IPR006186 GO:0016787
Bva13g01246 316 Pfam Calcineurin-like phosphoesterase 63 255 IPR004843 GO:0016787
Bva13g01246 316 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 9 309 - -
Bva13g01246 316 CDD MPP_PP1_PPKL 13 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01246 Bva-Chr13 6313232 6317405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01246 42 251 Calmodulin-binding Proteins AT5G63870 30.000 7.04e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01246 K06269 - fve:101309292 611.298