Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01224 ATGGTGATTGCAGACGAATCTCGTGTTGTTGATATAGACAATGGTTGTCGGCGGAGCTCTGACGGCGGCGGTGGAAGTGAAGAGTGTTCAGAGACCAGCGACAGGCTGTCAGATGACGAGCAAAGAACCTCGTCCTCCGTAGAGTCTGGTCCCGAGATTGTTGGAGTGTCTGATAAGGAGAGGAGATCCTCTGCATCCGAGTGTTCGGTGGAGGTGGATCTGGAGAGTGGGGCGGCAGAAGCAAAGGTACATTTAGCTACAGTGGAGAGGGATTGCAGGATTTGCCATCTGAGCATGGATATGACTAATCAAGAATCTGGAACCCCCATTGAGCTGGGATGCTCTTGTAAAGACGATTTGGCTGCAGCACACAAGCAGTGTGCTGAGGCTTGGTTCAAGATCAAGGGTAACAAAACCTGTGAAATCTGCGGATCAGTTGCGCTCAATGTAGCCGGTGCAGCTGAAGTTGAAATGGTAGAACAGTGGAATAATGAGGCAAATGACGTTGCCATGGTAGCAGCACCAACCGGGGCTTCGCCTACCGGAGAAACTCGAAATTTCTGGCAGGGTCATCGCTTCTTGAATTTCCTGCTAGCCTGTATGGTCTTTGCTTTTGTGATATCATGGCTTTTTCACTTCAATGTGCCCTCATG 653 0.5008 MVIADESRVVDIDNGCRRSSDGGGGSEECSETSDRLSDDEQRTSSSVESGPEIVGVSDKERRSSASECSVEVDLESGAAEAKVHLATVERDCRICHLSMDMTNQESGTPIELGCSCKDDLAAAHKQCAEAWFKIKGNKTCEICGSVALNVAGAAEVEMVEQWNNEANDVAMVAAPTGASPTGETRNFWQGHRFLNFLLACMVFAFVISWLFHFNVPS 217
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01224 217 MobiDBLite consensus disorder prediction 1 62 - -
Bva13g01224 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 152 IPR013083 -
Bva13g01224 217 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 10 217 - -
Bva13g01224 217 CDD RING_CH-C4HC3_MARCH 92 144 - -
Bva13g01224 217 Pfam RING-variant domain 92 143 IPR011016 GO:0008270
Bva13g01224 217 ProSiteProfiles Zinc finger RING-CH-type profile. 84 150 IPR011016 GO:0008270
Bva13g01224 217 PANTHER ZINC FINGER, RING-CH-TYPE 10 217 - -
Bva13g01224 217 SUPERFAMILY RING/U-box 89 146 - -
Bva13g01224 217 SMART ringv_2 91 144 IPR011016 GO:0008270
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva13g01224 Bva-Chr13 6109738 6111759 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01224 39 217 C3H Transcription Factor Family AT5G05830 66.480 1.65e-80 237
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01224 - - gmx:100816407 286.189