Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva13g01224 | ATGGTGATTGCAGACGAATCTCGTGTTGTTGATATAGACAATGGTTGTCGGCGGAGCTCTGACGGCGGCGGTGGAAGTGAAGAGTGTTCAGAGACCAGCGACAGGCTGTCAGATGACGAGCAAAGAACCTCGTCCTCCGTAGAGTCTGGTCCCGAGATTGTTGGAGTGTCTGATAAGGAGAGGAGATCCTCTGCATCCGAGTGTTCGGTGGAGGTGGATCTGGAGAGTGGGGCGGCAGAAGCAAAGGTACATTTAGCTACAGTGGAGAGGGATTGCAGGATTTGCCATCTGAGCATGGATATGACTAATCAAGAATCTGGAACCCCCATTGAGCTGGGATGCTCTTGTAAAGACGATTTGGCTGCAGCACACAAGCAGTGTGCTGAGGCTTGGTTCAAGATCAAGGGTAACAAAACCTGTGAAATCTGCGGATCAGTTGCGCTCAATGTAGCCGGTGCAGCTGAAGTTGAAATGGTAGAACAGTGGAATAATGAGGCAAATGACGTTGCCATGGTAGCAGCACCAACCGGGGCTTCGCCTACCGGAGAAACTCGAAATTTCTGGCAGGGTCATCGCTTCTTGAATTTCCTGCTAGCCTGTATGGTCTTTGCTTTTGTGATATCATGGCTTTTTCACTTCAATGTGCCCTCATG | 653 | 0.5008 | MVIADESRVVDIDNGCRRSSDGGGGSEECSETSDRLSDDEQRTSSSVESGPEIVGVSDKERRSSASECSVEVDLESGAAEAKVHLATVERDCRICHLSMDMTNQESGTPIELGCSCKDDLAAAHKQCAEAWFKIKGNKTCEICGSVALNVAGAAEVEMVEQWNNEANDVAMVAAPTGASPTGETRNFWQGHRFLNFLLACMVFAFVISWLFHFNVPS | 217 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva13g01224 | 217 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Bva13g01224 | 217 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 76 | 152 | IPR013083 | - | |
Bva13g01224 | 217 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 10 | 217 | - | - | |
Bva13g01224 | 217 | CDD | RING_CH-C4HC3_MARCH | 92 | 144 | - | - | |
Bva13g01224 | 217 | Pfam | RING-variant domain | 92 | 143 | IPR011016 | GO:0008270 | |
Bva13g01224 | 217 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 84 | 150 | IPR011016 | GO:0008270 | |
Bva13g01224 | 217 | PANTHER | ZINC FINGER, RING-CH-TYPE | 10 | 217 | - | - | |
Bva13g01224 | 217 | SUPERFAMILY | RING/U-box | 89 | 146 | - | - | |
Bva13g01224 | 217 | SMART | ringv_2 | 91 | 144 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva13g01224 | Bva-Chr13 | 6109738 | 6111759 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva13g01224 | 39 | 217 | C3H Transcription Factor Family | AT5G05830 | 66.480 | 1.65e-80 | 237 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva13g01224 | - | - | gmx:100816407 | 286.189 |