Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01208 ATGTATGGATCCAATAATCGAGCCCAAGGATTTaagaaaaccctaaacccaaacTTGCTCCGCTTTATAAAAACCCTAGTTTCTTCTCCGCGCGTCCAGCTCCTGCATCAAGGAACCACCGGCAGTTCTGCTTCAACCAGGGAGTTTCTGCAGTCAAAAATGGTGAAGGGACGCCAAGGAGAGCGTGTTAGGCTCTATGTCAGAGGTTCTATCCTTGGATACAAGAGGTCAAAATCAAACCAATACCCAAACACCTCTCTGATCCAGATTGAGGGAGTCAACACCCCAGAAGAGGTTGCATGGTATGCTGGCAAGCGCTTGGCTTACATCTACAAGGCCAAGGTGAAGAAGAATGGAAGCCACTATCGTTGTATCTGGGGCAAGGTTACCAGGCCTCATGGTAACAGTGGTGTTGTCCGTGCCAAATTCAAGTCAAACCTGCCACCTAAATCAATGGGAGCAAGGGTAAGAGTCTTTATGTATCCCAGCAATATCTA 497 0.4567 MYGSNNRAQGFKKTLNPNLLRFIKTLVSSPRVQLLHQGTTGSSASTREFLQSKMVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIEGVNTPEEVAWYAGKRLAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01208 165 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 67 159 IPR001780 GO:0003735|GO:0005840|GO:0006412
Bva13g01208 165 Pfam Ribosomal protein L35Ae 65 159 IPR001780 GO:0003735|GO:0005840|GO:0006412
Bva13g01208 165 ProSitePatterns Ribosomal protein L35Ae signature. 127 148 IPR018266 GO:0003735|GO:0005840|GO:0006412
Bva13g01208 165 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 54 165 - -
Bva13g01208 165 Gene3D translation elongation factor selb, chain A, domain 4 59 165 IPR038661 -
Bva13g01208 165 PANTHER 60S RIBOSOMAL PROTEIN L35A 54 165 IPR001780 GO:0003735|GO:0005840|GO:0006412
Bva13g01208 165 SUPERFAMILY Translation proteins 65 159 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01208 Bva-Chr13 6038590 6041982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01208 54 165 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 91.071 6.51e-75 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01208 K02917 - cpap:110814204 228.409