Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01194 atggAAACTCTATATCCATCTTCTTTTATGCCAAACCCAGCTTGGTTTGTGCAAGAGAGTCACAGCACAGAATGGACTAAAGAACAGAATAAGCTATTTGAAAGTGCCCTTGCCATATATGACAAGGACACCCCAGACCGATGGCTGAAGGTTGCAGCTATGATTCCTGGGAAAACCGTGTATGATGTGATAAAGCAGTACAGAGAATTATTAGAAGATGTTAGTGAAATAGAGGCAGGGAGGGTTCCGATTCCGGGGTACCTTACCTCTTCCTTCACGTTTGAGTTGGTTGATAATCACAATTATGATGCATATAGAAAGAGGCCTGCAGCAGTTAAGGGTTCTGAACAGGAGAGGAAGAAAGGGGTTCTATGGACAGAAGATGAACACAGGCGTTTTCTGATGGGACTTTTGAAGTATGGTAAAGGGGACTGGAGAAATATCTCTCGCAATTTTGTAGTCACAAAGACTCCAACACAAGTGGCAAGCCATGCTCAGAAGTACTATATAAGGCAGCAGAATCATTCTGGTGTCAAAGACAGGAGGAGACCCAGTATACATGATATTACCATTGTTAATCTCACAGAATCCATCACAGAAGATAACAGCAAGCCCCTTTTGCTCAATGAGTCTCCTTTGCTTTCGCCACAGCACAAGTCGCCAAAAGTACAAGCTTCAGCTGGTATTGCTTCAGAGGACCTAAAACTGAAGGGGCAGGACCTCTATGACTGTCTCCATGGGGCTTATACCAAATTCAAAGCTCAGGGTTTCAGAAGTGCTTCTAAAGAGTTCAACCAGGCAGTTGTTTTTGGTATTCATGCATTGTA 827 0.4317 METLYPSSFMPNPAWFVQESHSTEWTKEQNKLFESALAIYDKDTPDRWLKVAAMIPGKTVYDVIKQYRELLEDVSEIEAGRVPIPGYLTSSFTFELVDNHNYDAYRKRPAAVKGSEQERKKGVLWTEDEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQQNHSGVKDRRRPSIHDITIVNLTESITEDNSKPLLLNESPLLSPQHKSPKVQAGIASEDLKLKGQDLYDCLHGAYTKFKAQGFRSASKEFNQAVVFGIHAL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01194 273 CDD SANT 125 168 IPR001005 -
Bva13g01194 273 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 233 IPR043363 -
Bva13g01194 273 Pfam Myb-like DNA-binding domain 125 168 IPR001005 -
Bva13g01194 273 ProSiteProfiles Myb-like domain profile. 117 169 IPR001005 -
Bva13g01194 273 Gene3D - 124 174 - -
Bva13g01194 273 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 117 173 IPR017930 -
Bva13g01194 273 SUPERFAMILY Homeodomain-like 23 77 IPR009057 -
Bva13g01194 273 SMART sant 21 73 IPR001005 -
Bva13g01194 273 SMART sant 121 171 IPR001005 -
Bva13g01194 273 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 120 172 IPR006447 GO:0003677
Bva13g01194 273 CDD SANT 24 71 IPR001005 -
Bva13g01194 273 ProSiteProfiles Myb-like domain profile. 25 71 IPR001005 -
Bva13g01194 273 SUPERFAMILY Homeodomain-like 118 174 IPR009057 -
Bva13g01194 273 ProSiteProfiles SANT domain profile. 125 173 IPR017884 -
Bva13g01194 273 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 233 - -
Bva13g01194 273 Gene3D - 17 84 - -
Bva13g01194 273 ProSiteProfiles SANT domain profile. 20 75 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01194 Bva-Chr13 5990040 5992170 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva13g01194 Myb_DNA-binding 1.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01194 - - gmx:778039 399.823