Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01184 ATGGAAGAAGGCATGTCAGGGTTTTGCTTCAGAAGTGCAAGTGTTGGAGGTAGCAGTGGAAGCACTGCTGGGACTAAGTGTGGGCGTTGGAATCCAACTACTGAGCAGGTTAAGCTTCTGACTGAACTCTTCAGGTCTGGACTCAGAACACCAAGTACTGATCAGATTCAGAAGATCTCTACTCAGCTCAGCTTTTATGGTAAGATTGAGAGCAAGAATGTTTTCTATTGGTTTCAGAACCATAAAGCTAGGGAAAGACAGAAGCGTCGCAAAGTTTCCTTCGATGAGAAGGAAACTATGGTTCGTAAAGAAAACACTAAAGTTTGTTCTACACAAAATTTTGCAGAGGTGAATCAAGTTTCAGAGCCAGAGAGAGTGATGGAGACACTTCAATTATTCCCATTGAACTCCTTTGGTGAAGCTGCAGAAACAGAGAAGCTGAGGGTTCACGGAAATGATCAATGTAGAGGAAACACAATGTTTTCATACACAATGGGGGAACAAATGGAACATCCACCATTAGATCTGCGCTTGAGCTTTGCATA 545 0.4275 MEEGMSGFCFRSASVGGSSGSTAGTKCGRWNPTTEQVKLLTELFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKRRKVSFDEKETMVRKENTKVCSTQNFAEVNQVSEPERVMETLQLFPLNSFGEAAETEKLRVHGNDQCRGNTMFSYTMGEQMEHPPLDLRLSFA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01184 181 Pfam Homeodomain 27 87 IPR001356 GO:0003677
Bva13g01184 181 Gene3D - 26 95 - -
Bva13g01184 181 SMART HOX_1 25 92 IPR001356 GO:0003677
Bva13g01184 181 SUPERFAMILY Homeodomain-like 21 91 IPR009057 -
Bva13g01184 181 CDD homeodomain 29 89 IPR001356 GO:0003677
Bva13g01184 181 ProSiteProfiles 'Homeobox' domain profile. 23 88 IPR001356 GO:0003677
Bva13g01184 181 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 170 IPR044555 GO:0003700|GO:0099402
Bva13g01184 181 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01184 Bva-Chr13 5919702 5920631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01184 8 180 Wox Gene Family AT3G11260 56.216 1.32e-63 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva13g01184 Homeodomain 6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01184 - - pvu:PHAVU_008G226100g 273.478