Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01166 atggaTTCCGATTTCTGGACCTCGCGCCTCGCCGCTGTCAAACGCCAGTATACACTTCAGCAACATCATCAGAGCTCCCACTTAGATCAATTGGGGATCGATGATTTCGACGTGGAAGACGAGGTCCGAGCCGATTTCCCATGCCCGTATTGTTACGAAGATTTCGACATCGCGTCCCTGTGTTCGCATCTCGAAGACGAGCATGCGTGCGAATCGAAAGTCACGATTTGCCCCGTATGCTCGGTTAAAGTTACACGGGACATGTTGAGTCACATAACGCTGCAGCATGGGCACTTGTTTAAGATATCCTTTTATAGACGGCGCAGGTTAAGAAGAGGAGCTATTCCTAGTAGTCAGGCATTGTCTCTTTTGGGCCGGGATCTTCGCGAGGCTCATTTGCAGCTGCTTCTCGGGGCggctggtggtggtggtggtggataTCGTTCAAACAGTTTTAATGCCGCTACTGATCCATTCCTATCCTCacttattttgaatttccCTGCTTCTGAAGcagaagaaatttcaaaaactgTTGTAACCAGTTCTGAAGATTCTTCTTCAAAGAATGCAGCACCTGCTCATATTTGGAAATCAAGTTTTGATCCCTCCTTGAGTAGCGAAGAACGCGAGAAAAGGATGAGGCAAGCTGCAGGAAGGTCAGGTTTCGTGCAGGATTTGTTTGTTTCGACTTTGCTAGGCGACTA 707 0.4413 MDSDFWTSRLAAVKRQYTLQQHHQSSHLDQLGIDDFDVEDEVRADFPCPYCYEDFDIASLCSHLEDEHACESKVTICPVCSVKVTRDMLSHITLQHGHLFKISFYRRRRLRRGAIPSSQALSLLGRDLREAHLQLLLGAAGGGGGGYRSNSFNAATDPFLSSLILNFPASEAEEISKTVVTSSEDSSSKNAAPAHIWKSSFDPSLSSEEREKRMRQAAGRSGFVQDLFVSTLLGD 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01166 235 Pfam Drought induced 19 protein (Di19), zinc-binding 45 97 IPR008598 -
Bva13g01166 235 Pfam Stress-induced protein Di19, C-terminal 121 232 IPR027935 -
Bva13g01166 235 SUPERFAMILY TRAF domain-like 45 103 - -
Bva13g01166 235 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 234 IPR033347 -
Bva13g01166 235 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01166 Bva-Chr13 5817779 5821664 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva13g01166 Di19_C 9.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01166 - - qsu:112040972 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01166 13 5817779 5821664 Bva13g01166 13 5817779 5821664 ECH
Bva14g01421 14 7086532 7089031 Bva13g01166 13 5817779 5821664 ECH