Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01146 ATGTCGTCAAGCTCGGGAAGACCATGGGATTCTGAGAAAATCCTTCAACTATATCTGCACGACTATATGGTCAGAAGGGGAATGCATGAGACCGCTGCAATTTTCAAAAAGGAGGCAGGTGTTTATCAAGATTCTGCTGTGATGGATTCGCCAAATGGCTTCCTGCATGAATGGTGGTCTATTTTCAATGAGGTGTACTCTagcaaagaacaaaacaatcaGAAGAATGGACCTGAATCCTCTAATAAGGTGATCGCTCATCTGCAGGAAGATATTGACAAGCAGCCTCAAAAGCAAGTCTTTAGGTTTCAGGACAGTGGAGGTGGCATTCACCTGGAGAGGGATGAGCCTAGAGACCCTCAGTATATTGTAGAAAGAACTATTAAGCCTGTAAATGGACCTCGCGAAAAAAAAACAAGCGATGGATTAAATCTGGTGCCACAAGACGGATCGCGGCCTTTAGACGTGGCAGATGTAGTATG 482 0.4315 MSSSSGRPWDSEKILQLYLHDYMVRRGMHETAAIFKKEAGVYQDSAVMDSPNGFLHEWWSIFNEVYSSKEQNNQKNGPESSNKVIAHLQEDIDKQPQKQVFRFQDSGGGIHLERDEPRDPQYIVERTIKPVNGPREKKTSDGLNLVPQDGSRPLDVADVV 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01146 160 Pfam LisH 19 39 IPR006594 GO:0005515
Bva13g01146 160 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 9 120 IPR044716 GO:0003714
Bva13g01146 160 MobiDBLite consensus disorder prediction 126 160 - -
Bva13g01146 160 ProSiteProfiles LIS1 homology (LisH) motif profile. 11 43 IPR006594 GO:0005515
Bva13g01146 160 SMART Lish 11 43 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01146 Bva-Chr13 5702621 5704641 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Bva13g01146 LisH 2.9e-05 CL0561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01146 - - gmx:100816007 102.064