Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01139 ATGGTAGGCGGATTTGAAGTCGGAGCTGTTCCATTTAACCCAGATGGATGGGGCCCACCAGACGCTGCCACCACCGTCTCTTCCGCCTCCACCCTTCCCCTGAACGTTCCCTTTGCTCCCTTTTCGCGGTCCGATAAGCTGGGTCGGATCGCCGATTGGACCCGAAATTTCAACAATCCTACACGACCCAAGGGTACCGCCGATGCCGTTTTCGACTTCACCAACGACGACTCCTTCCCCGCCTCCGCAGATGATGACTCCACCTTCCGCCTTGTTGACGGAAAACCACCCCCGCGGCCCAAATTTGGCCCCAGATGGCGGTTCCAGCAGCAACGTCAGCTTCCTCAGCGCCGTGATGAAGAGGTGGAAGCTCGAAAACGTGAGGCTGAGAAGGAGAGGGCTCGCCGTGACCGTCTCTACAATCTCAATAGATCCAATGCCAATAACAACCGTCGTGAAGCGGCCGTTTTCAAATCCTCTGTGGATATTCAGCCAGAATGGAACATGTTGGACCAGATTCCATTCTCAACCTTCTCCAAGCTGTCATTCACTGTTCCTGAACCTGAAGACCTTCTACTCTGTGGTGCGCTTGAGTATTATGATAGGTCTTATGACCGAATCACTCCGAAGAACGAGCGCCGTCTTGAGAGGTTTAAGAATAGGAACTTCTTCAAGGTTACGACCACTGATGACCCAGTGATTCGGAGGCTTGCTAACGAGGATAAAGCTACAGTCTTTGCTACTGATACAATCCTTTCAACGCTTATGTGCGCACCCAGGTCAGTTTACTCTTGGGATATTGTTATTCAGCGTGTTGGGAACAAGTTGTTCTTCGATAAGAGAGATGGGTCGCAGTTGGATTTGCTTTCTGTACATGAGACCTCTCAGGAGCCCCTGCCTGAGGCTAAGGATGACATTAACTCTGCGCACTCGTTGAGTGTTGAGGCAGCTTATATTAATCAGAATTTCTCGCAGCAAGTTTTGATTAGAGATGGTAACAAGGTGAATTTTGATGAGCCAAACCCATTTGCTAATGAGGGTGAAGAGGTTGCTTCTGTGGCCTATAGGTATAGAAGGTGGAAGCTTGATGACGATATGTATCTTGTGGCAAGGTGTGAGGTTCAGAGTGTTGTTGAATTGAACAAGCAAAGGTCCTTCCTTACTTTGAATGCCCTAAATGAATTCGATCCCAAATATTCTGGGGTGGAATGGAGACAGAAGTTAGAGACGCAGAGGGGTGCTGTCTTGGCCACAGAGTTGAAGAACAATGCTAATAAGTTGGCTAAATGGACTGCTCAAGCTCTTTTGGCAAGTGCAGATATGATGAAGTTGGGATATGTCTCCAGGGTTCATCCCCGTGatcattttaatcatgtgATTTTGGCTGTGGTTGGATATAAGCCTCGGGATTTCGCAGGACAAATCAATTTGAACACAGCTAATATGTGGGGTATTGTGAAGTCTATTGTGGACTTGTGCATGAAACTTAATGAGGGAAAGTATGTTCTAGTGAAGGATCCATCTAAGCCCCAAGTTAGAATCTATGAGGTTCCTGCAGATGcatttgaaaatgattatGTGGAGGAGCCTCTGCCTGAGGAGGAACAAGCCCAACCTCCAACTGAGGGTGCTGATGGGGATGCAACTGCTGCAACGAATGATGTAGAGGATAAGCAGACTGATGCTCAAGCGTG 1694 0.4776 MVGGFEVGAVPFNPDGWGPPDAATTVSSASTLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRPKGTADAVFDFTNDDSFPASADDDSTFRLVDGKPPPRPKFGPRWRFQQQRQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNANNNRREAAVFKSSVDIQPEWNMLDQIPFSTFSKLSFTVPEPEDLLLCGALEYYDRSYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVNFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVVELNKQRSFLTLNALNEFDPKYSGVEWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPRDFAGQINLNTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEEEQAQPPTEGADGDATAATNDVEDKQTDAQA 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01139 564 PIRSF Transl_init_eIF3d 1 546 IPR007783 GO:0003743|GO:0005737|GO:0005852
Bva13g01139 564 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 528 IPR007783 GO:0003743|GO:0005737|GO:0005852
Bva13g01139 564 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 6 516 IPR007783 GO:0003743|GO:0005737|GO:0005852
Bva13g01139 564 MobiDBLite consensus disorder prediction 112 133 - -
Bva13g01139 564 MobiDBLite consensus disorder prediction 525 564 - -
Bva13g01139 564 MobiDBLite consensus disorder prediction 92 133 - -
Bva13g01139 564 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 4 564 - -
Bva13g01139 564 Coils Coil 117 137 - -
Bva13g01139 564 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 564 IPR007783 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01139 Bva-Chr13 5669713 5673235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01139 4 564 Eukaryotic Initiation Factors Gene Family AT4G20980 78.741 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01139 K03251 - zju:107424068 978.393