Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01138 ATGGAGAACAGCCCTAGTTCATCAAGAAcggaaagaaaattcatagaGAGGAACAGAAGAAATCAAATGAAGGCTCTTCACTCCCAGCTCAACTCACTTGTGCCTCATCAAAACTCAAGGGAAGTGACATCACTGCCAGATCAACTAGATGAAGCCACAAACTACATAAAGAAGTTGCAGATTAACTTGGAGAGAATGAAGGACAAGAAAGACAGCCTAATAGGGATTCAAGATGTGAACAAGAATGAAGGAAAGATTTTGGGGATAAAACCACCGCAAATTGAGATCCATCATAAGGGTTCTGCCTTAGAGGTTGTTCTAATAACTGGGTTAGATTTTCAGTTCATGTTCAACGTGGTGGTTCGGGTTCTTCACGAAGAAGGAGCTGACATTGTTAATGCCAGTTACACAGTTGTTCAAGATACTGTTCTTCACATGATACATTCTAAGGTGGAGCGATCTGCAGATGGAGCTGCTAGGATTTCTGAGAGACTTAACAAGCTTATGTATGATTCTGGTGCATTTTG 527 0.3985 MENSPSSSRTERKFIERNRRNQMKALHSQLNSLVPHQNSREVTSLPDQLDEATNYIKKLQINLERMKDKKDSLIGIQDVNKNEGKILGIKPPQIEIHHKGSALEVVLITGLDFQFMFNVVVRVLHEEGADIVNASYTVVQDTVLHMIHSKVERSADGAARISERLNKLMYDSGAF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01138 175 Pfam Helix-loop-helix DNA-binding domain 9 60 IPR011598 GO:0046983
Bva13g01138 175 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 170 IPR015660 GO:0003700|GO:0006357
Bva13g01138 175 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 59 IPR011598 GO:0046983
Bva13g01138 175 Gene3D - 1 85 IPR036638 GO:0046983
Bva13g01138 175 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 74 IPR036638 GO:0046983
Bva13g01138 175 Coils Coil 49 76 - -
Bva13g01138 175 PANTHER TRANSCRIPTION FACTOR BHLH162 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01138 Bva-Chr13 5665497 5666743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01138 3 169 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 43.333 2.07e-44 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva13g01138 HLH 8.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01138 - - zju:107406159 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01138 13 5665497 5666743 Bva14g01388 14 6901332 6902275 BWGD