Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01122 ATGGCTGAAAATGTGTTGGAGCTCAACCATGGCGGTTCTGCTAATAAGGCTGATGCTTCTGCCTCCGGTCAGTCTCCGAAACGGCGGAGCCCGCCGCCGTTTCTGTTGAAGACTTATGATCTGTTAGAAGAAAGTGGAGCAGTTGGTAATGATGATGGAGATGAAGATGGTAAAAGGATTGTGTCATGGAACGCAGAAGGGAATGGCTTTGTAGTGTGGTCTCCTGATAAGTTCTCAGAGTTCATCTTGCCCAGATTTTTCAAGCACAGCAACTTCTCAAGCTTCATTCGCCAATTGAATACCTATGGATTTAAGAAAACATCATCAAAAAGATGGGAATTCAAGCACGACAAGTTCCAGAGGGGCTGCAAGCATTTGCTGATGGAAATTACCAGGAAAAAAGGCGAGGCGAGCATGTTTCCATCATACCTAAAGTCTTGTACGGAGGAGAATAATGCAGTGACTAATTCCATCGGAGAAAGTAATCAGGATGAACTGATGGAAGAGAACAGGAATCTGAAAAAGGAAAGGTCACAGCTTCAAATGCAGATAGCTCAATTCAAAGCACTGGAGATGAAGTTGTTGGAGTGTCTCTCTCAGTATATGGACAAGCACCAGATTAATGAGAAAGTTAGGAGACTGTGTTA 647 0.4374 MAENVLELNHGGSANKADASASGQSPKRRSPPPFLLKTYDLLEESGAVGNDDGDEDGKRIVSWNAEGNGFVVWSPDKFSEFILPRFFKHSNFSSFIRQLNTYGFKKTSSKRWEFKHDKFQRGCKHLLMEITRKKGEASMFPSYLKSCTEENNAVTNSIGESNQDELMEENRNLKKERSQLQMQIAQFKALEMKLLECLSQYMDKHQINEKVRRLC 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01122 215 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 213 IPR027725 -
Bva13g01122 215 Coils Coil 156 190 - -
Bva13g01122 215 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2A-LIKE 18 213 - -
Bva13g01122 215 Pfam HSF-type DNA-binding 34 133 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva13g01122 215 SUPERFAMILY "Winged helix" DNA-binding domain 30 133 IPR036390 -
Bva13g01122 215 Gene3D - 26 134 IPR036388 -
Bva13g01122 215 SMART hsfneu3 30 133 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva13g01122 215 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01122 Bva-Chr13 5550227 5551891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01122 17 202 HSF AT5G62020 36.111 6.43e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bva13g01122 HSF_DNA-bind 2.1e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01122 K09419 - gmx:100789792 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01122 13 5550227 5551891 Bva13g01122 13 5550227 5551891 ECH