Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01116 ATGTATATAGCTACCATGCGAAAGTCTTTCAAGGACTCCTTGAAAGTTCTTGAAGCTGATATCCAGCATGCCAATACCCTGGCATCGGATTTTTCCAGGGAGTATGACGGTGCTTGCCTTCAAATGAGAATGTCATACAGTCCGGCTGCACAcctgtttctttttctggtgCAATGGACAGACTGCAATCTTGCAGGCGCTCTTGGACTGTTAAGAATCCTAATTTACaagGTTTACGTGGATGGGACAACCACCATGTCTACCcatgaaagaaaagcaagtaTCAGAGAATTCTATGCGGTGATTTATCCCTCTTTATTGCAACTTCAAAAAGGCGTCACTGATACAGAGGATAAAAAGCAAAAGGCTGTATGTATGGAGAGGTATCGAAGAAGAGATGATGAGGAGCATAGGCAATCATCAGATTTAGAAactgaaagagaagaagaatgtgGAATATGCATGGAGATGAATAGTAAGATTGTGTTGCCCAATTGCAACCATGCCATGTGCTTGAAATGTTACCGTGAATGGAGAACAAGGTCACAGTCCTGTCCTTTCTGCCGTGACAGTCTCAAGAGAGTTAACTCAGGTGATCTCTGGGTATTCACTGACAGTAGAGATGTTGTAGATATGGCAACTGTGACAAGGGAGAATCTTAGAAGGCTCTTCATGTACATAGATAAGTTGCCTTTGATTGTTCCAGACTCTCTCTTCGACACATACGACTCCCACCTAAGATA 743 0.3957 MYIATMRKSFKDSLKVLEADIQHANTLASDFSREYDGACLQMRMSYSPAAHLFLFLVQWTDCNLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDKKQKAVCMERYRRRDDEEHRQSSDLETEREEECGICMEMNSKIVLPNCNHAMCLKCYREWRTRSQSCPFCRDSLKRVNSGDLWVFTDSRDVVDMATVTRENLRRLFMYIDKLPLIVPDSLFDTYDSHLR 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01116 247 PANTHER RING FINGER PROTEIN 41, 151 4 247 - -
Bva13g01116 247 SMART ring_2 151 188 IPR001841 -
Bva13g01116 247 ProSitePatterns Zinc finger RING-type signature. 166 175 IPR017907 -
Bva13g01116 247 ProSiteProfiles Zinc finger RING-type profile. 151 189 IPR001841 -
Bva13g01116 247 PANTHER PEROXISOME BIOGENESIS FACTOR 10-LIKE 4 247 - -
Bva13g01116 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 131 198 IPR013083 -
Bva13g01116 247 Pfam Zinc finger, C3HC4 type (RING finger) 148 194 - -
Bva13g01116 247 SUPERFAMILY RING/U-box 150 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01116 Bva-Chr13 5523681 5528096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01116 122 189 Glycosyltransferase AT5G37200 35.616 1.19e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01116 K25840 - qsu:112034999 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01116 13 5523681 5528096 Bva14g01350 14 6701006 6704881 BWGD