Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01112 ATGAGTTGTTGCTGCTTCGGGGCCTCAACttcaaagaggaaaagaagttCTCCTCGTGCTCCTGAGGCCATTGATGGCATTCCACTTGATAATGTTAGGCATTTCTCTGAGCAAGAACTAAGGTTGGCAACCAACAACTATGATTCGAGAAATAAGATTGGACGAGGAGGTTTTGGAACTGTTTATCAGGGAACCTTGAAAGATGGAAAGGTAGTGGCAGTGAAGAGCCTTTCTGCTGGATCAAGACAGGGAGTTCGAGAATTTATAACCGAGATTAAGACTATAACAAACGTCAGGCATCCAAACCTTGTTGAACTGCTTGGCTGCTGTGTTCAAGGACAAAAACGTATCTTAGTCTATGAATATATGGAAAACAACAGCCTTAGCCTTACATTACTAGGCTCGAGGAACACTCGGATCAAACTGGATTGGAGTAAAAGATCTGCAATTTGCACGGGTACCGCTAAGGGTCTGGCATTCCTTCATGAAGAACTTGAGCCCCGCATCGTGCACAGAGACATCAAAGCCAGCAACATATTGCTTGACAGAGACTTTAATCCAAAAATAGGGGATTTTGGGGTGGCTAAACTGTTTCCAGACGACATCACTCACATTAGCACAAAGATTGCTGGAACAACTGGTTATTTAGCACCAGAATATGCGTTAGGTGGTCAATTAACCATGAAAGCTGATATATATAGCTTTGGAGttcttatatttgaaataattagcGGCAAAAGCGGTGCAAGGACAAACTGGGGAGGAACAATGAAATTCCTCTTGGAATGGGCCTGGGAGCTTTATAAAGAGGGGAGACTCTTGGAGCTTGTAGATTCAGAGATGGGGGAATTTCCAGAGAAAGAAGTAATTAGGTACATGAAGGTGGCCCTCTTCTGCACACAGGCAGCAGCAAGCAGGAGGCCATTGATGTCCCAAGTTGTAGACATGCTCTTCAAGAATATCAGACTAAACGAGAAGGAACTTACTGCGCCAGGATTCTTCCAAGATTCTGGTCTTTTTTCTGGAGAACCCTCTCAAAAGCAGTCATCCAGATCAATTGACACTACAATCTCTACCGTTACCAGCATTACTGATGTAAACCCACGATG 1109 0.4274 MSCCCFGASTSKRKRSSPRAPEAIDGIPLDNVRHFSEQELRLATNNYDSRNKIGRGGFGTVYQGTLKDGKVVAVKSLSAGSRQGVREFITEIKTITNVRHPNLVELLGCCVQGQKRILVYEYMENNSLSLTLLGSRNTRIKLDWSKRSAICTGTAKGLAFLHEELEPRIVHRDIKASNILLDRDFNPKIGDFGVAKLFPDDITHISTKIAGTTGYLAPEYALGGQLTMKADIYSFGVLIFEIISGKSGARTNWGGTMKFLLEWAWELYKEGRLLELVDSEMGEFPEKEVIRYMKVALFCTQAAASRRPLMSQVVDMLFKNIRLNEKELTAPGFFQDSGLFSGEPSQKQSSRSIDTTISTVTSITDVNPR 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01112 369 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Bva13g01112 369 SUPERFAMILY Protein kinase-like (PK-like) 26 318 IPR011009 -
Bva13g01112 369 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 362 - -
Bva13g01112 369 SMART serkin_6 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01112 369 Gene3D Transferase(Phosphotransferase) domain 1 123 330 - -
Bva13g01112 369 PANTHER - 1 362 - -
Bva13g01112 369 ProSiteProfiles Protein kinase domain profile. 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01112 369 Gene3D Phosphorylase Kinase; domain 1 20 122 - -
Bva13g01112 369 Pfam Protein tyrosine and serine/threonine kinase 50 317 IPR001245 GO:0004672|GO:0006468
Bva13g01112 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Bva13g01112 369 CDD STKc_IRAK 53 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01112 Bva-Chr13 5491237 5495618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01112 35 323 Receptor kinase-like Gene Family AT1G53430 55.172 1.41e-107 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva13g01112 PK_Tyr_Ser-Thr 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01112 - - gmx:100788143 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01112 13 5491237 5495618 Bva14g01343 14 6649626 6653990 BWGD