Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01094 ATGGCGGTGAAACCCTCAAAGGCCGACAAGAAGATTGCTTACGATGCTAAGCTGTGCCAGCTTCTGGAGGAATACACTCAGATCCTAATTGTGGCAGCTGACAATGTTGGATCTAACCAACTTCAGAACATCCGAAGGGGTCTGCGTGGTGACTCAGTGGTTCTCATGGGTAAAAACACCATGATGAAGCGCTCTGTCAGAATACACTCTGAGAAAACCGGCAACCAGGCATTCCTCAACCTTATCCCCCTCCTTGTGGGCAACGTGGGATTGATTTTCACTAAAGGTGACTTGAAGGAGGTCAGCGAAGAGGTTGCTAAGTACAAGGTTGGAGCTCCTGCTCGTGTTGGTCTGGTTGCTCCAATTGATGTTGTTGTCCCTCCCGGCAACACAGGGCTTGATCCCTCACAGACCTCTTTCTTCCAGGTGCTCAATATCCCCACCAAGATTAACAAGGGTACTGTTGAAATTATTACCCCTGTGGAACTTATTAGGAAGGGTGATAAGGTCGGCTCTTCTGAGGCTGCTTTGCTTGCAAAGCTTGGTATTAGGCCCTTCTCTTATGGGCTTGTGGTTCTGTCTGTGTATGATAATGGATCAGTGTTTAGCCCTGAGGTGCTTGATCTGACTGAGGATGACCTCATTGAGAAGTTTGCTGCGGGTGTTTCCATGGTGACTGCACTTTCATTGGCTATCTCATACCCAACCCTTGCAGCTGCCCCACACATGTTTATCAATGCCTACAAGAATGTCCTGGCTGTTGCAGTTGCCACCGAGTATTCCTTCCCTCAGGCCGATGAAGTTAAGGAGTACTTAAAGGATCCAAGTAAATTTGCTGTTGCTGCCGTTGCTGCCCCTGCTGCTGCTGATTCTGGATCTGCTCCTGCTGCTGCTAAGgtggaggaaaagaaagaagagccAGAAGAAGAGTCTGATGATGATATGGGTTTTAGCTTATTCGACTA 965 0.4715 MAVKPSKADKKIAYDAKLCQLLEEYTQILIVAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRSVRIHSEKTGNQAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIEKFAAGVSMVTALSLAISYPTLAAAPHMFINAYKNVLAVAVATEYSFPQADEVKEYLKDPSKFAVAAVAAPAAADSGSAPAAAKVEEKKEEPEEESDDDMGFSLFD 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01094 321 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 1 321 - -
Bva13g01094 321 Pfam 60s Acidic ribosomal protein 234 320 - -
Bva13g01094 321 PIRSF L10E 1 321 IPR030670 GO:0042254
Bva13g01094 321 Gene3D - 6 209 IPR043141 -
Bva13g01094 321 Gene3D - 114 185 IPR043164 -
Bva13g01094 321 MobiDBLite consensus disorder prediction 288 321 - -
Bva13g01094 321 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 321 - -
Bva13g01094 321 SUPERFAMILY Ribosomal protein L10-like 9 134 IPR043141 -
Bva13g01094 321 MobiDBLite consensus disorder prediction 306 321 - -
Bva13g01094 321 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Bva13g01094 321 CDD Ribosomal_P0_L10e 10 185 - -
Bva13g01094 321 Pfam Ribosomal protein L10 7 108 IPR001790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01094 Bva-Chr13 5380420 5382798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01094 1 320 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 85.312 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01094 K02941 - vvi:100250067 551.592