Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01090 atGGAGGCTAAGGAGCAAGATGTTTCGTTGGGAGCCAACAAGTTCCCAGAGAGGCAGCCGATTGGTACGGCGGCTCAGAGCCAAGATGATGGGAAGGACTACCAGGAGCCACCACCGGCGCCGCTGTTTGAGCCATCAGAGCTGACATCGTGGTCGTTCTACAGAGCCGGGATAGCCGAGTTTGTTGCAACTTTTCTGTTCCTGTACATCACGGTCTTGACGGTTATGGGTGTGGTTAGCGCCGATTCCAAGTGCAAAACCGTTGGAATCCAAGGGATCGCTTGGGCTTTTGGTGGTATGATCTTTGCCCTCGTCTACTGCACCGCTGGCATCTCAGGTGGTCACATTAACCCAGCAGTGACATTCGGGCTGTTCCTTGCAAGGAAGCTGTCCTTGACAAGGGCATTGTTCTACATGGTTATGCAATGCCTTGGTGCCATCTGCGGTGCTGGTGTGGTAAAGGGATTCGAGGGCAAAGCCAAATATGGAAGGTTAAACGGAGGTGCCAATTTTGTTAACTCTGGTTACACCAAAGGTGACGGGCTCGGTGCTGAGATCGTTGGCACCTTCGTCCTCGTCTACACCGTCTTCTCAGCCACCGATGCCAAGCGCAGCGCCAGAGACTCTCACGTCCCTATTTTGGCACCCTTGCCAATCGGGTTCGCTGTCTTCTTGGTCCACTTGGCCACCATCCCCATCACCGGAACCGGATCAACCCAGCTCGTAGTCTTGGGGCAGCCATTATCTTCAACAAGGACCTTGGCTGGGATGAACACTGGATTTTCTGGGTGGGACCATTCATTGGAGCAGCACTGGCAGCTCTGTACCACCAAGTCGTCATCAGGGCCATTCCCTTCAAGAACAACTGATTCACTCGAACGGTGCATGAATTGTGATCGTTG 902 0.5355 MEAKEQDVSLGANKFPERQPIGTAAQSQDDGKDYQEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITVLTVMGVVSADSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFEGKAKYGRLNGGANFVNSGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGSTQLVVLGQPLSSTRTLAGMNTGFSGWDHSLEQHWQLCTTKSSSGPFPSRTTDSLERCMNCDR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01090 300 PANTHER AQUAPORIN PIP1-2 ISOFORM X2 1 239 - -
Bva13g01090 300 SUPERFAMILY Aquaporin-like 47 236 IPR023271 -
Bva13g01090 300 Pfam Major intrinsic protein 47 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g01090 300 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g01090 300 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g01090 300 PRINTS Major intrinsic protein family signature 220 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g01090 300 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g01090 300 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g01090 300 CDD MIP 55 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g01090 300 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Bva13g01090 300 Gene3D Glycerol uptake facilitator protein. 40 277 IPR023271 -
Bva13g01090 300 MobiDBLite consensus disorder prediction 1 39 - -
Bva13g01090 300 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 239 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01090 Bva-Chr13 5361939 5363572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01090 1 279 Major Intrinsic Protein MIP AT2G45960 74.377 1.68e-141 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01090 K09872 - gmx:100780145 449.129