Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01083 ATGGATAGCATAGATTCATCTTCTGGGTCTCAGCATCCTCAGCTCCCACCAGGGTTTCGCTTCCACCCCACCGACGAGGAACTCGTCGTTCACTACCTCAAAAGAAAAGCGGCGTCTGCTCCTCTTCCCGTCGCCATCATCGCCGACGTCGATCTCTACAAGTTCGACCCTTGGGAGCTCCCAAGTAAGGCAACGTTTGGTGATCAAGAATGGTACTTTTTCAGTCCAAGAGATAGGAAATACCCAAATGGGGCGAGGCCAAACAGGGCTGCAACTTCTGGGTATTGGAAAGCTACTGGGACTGATAAGCCTATATTGACTTCTGATGGGCACCAGAAGGTTGGGGTTAAAAAGGCTCTTGTTTTCTATGGTGGGAAGCCTCCAAAAGGGGTTAAAACCAATTGGATCATGCATGAATATAGGCTTGCTGAGAATTCTGCAGTTAATTCTAACTCAAAACCACCACTTGTTCCTGATGTTGCCGgatataacaataataagaaGAACTCTTTAAGGCTTGATGACTGGGTACTGTGCCGAATATACAAGAAGaacaatattaataatctGCAGAGGCCACTGCTGATAGATCAGGATAAGGAGCTTTCCGTGGAGGCTATGCTACCAACGATGCCAACTTTGTCAATGGCAAATACCCACCAAAACGCGAAATCTTCGAGAACCACAAGCTATGGCTCACTTGGGATAGAAAATGATGACAACTTTTTTGATGGAATCTTAGCTGCCGACCACAGCATGCAGCAAAACGGTGCTGATCACTCTCATCATCACCACTTCGTGCACCAAAACTCAAAGGGGAGTTTTCCCCTGAAACGAGCTCTACCTTCACAGCTTTGGAATGAGACAGAGTCCACAGTGTCATCTTCTCCAAGCAAGCGATTCAATGGAGATCTTAACAACAGAGGGAACAGTGCCACTGAGGAAAACAGTTACTTTGTTTCTCTGCTAAGCCAACTCCCTCAGAGCACAACGTTTCACCCTAATGCGCTGCTCGGTTCGGTGGGTGACAGTGTTTTGAGGCAGCAGTTTCAACTCCCAGCAAGCATGAATTGGAATTCATA 1082 0.4612 MDSIDSSSGSQHPQLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIADVDLYKFDPWELPSKATFGDQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSDGHQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLAENSAVNSNSKPPLVPDVAGYNNNKKNSLRLDDWVLCRIYKKNNINNLQRPLLIDQDKELSVEAMLPTMPTLSMANTHQNAKSSRTTSYGSLGIENDDNFFDGILAADHSMQQNGADHSHHHHFVHQNSKGSFPLKRALPSQLWNETESTVSSSPSKRFNGDLNNRGNSATEENSYFVSLLSQLPQSTTFHPNALLGSVGDSVLRQQFQLPASMNWNS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01083 360 MobiDBLite consensus disorder prediction 290 309 - -
Bva13g01083 360 ProSiteProfiles NAC domain profile. 15 184 IPR003441 GO:0003677|GO:0006355
Bva13g01083 360 SUPERFAMILY NAC domain 10 184 IPR036093 GO:0003677|GO:0006355
Bva13g01083 360 MobiDBLite consensus disorder prediction 1 20 - -
Bva13g01083 360 PANTHER NAC TRANSCRIPTION FACTOR 56-LIKE 1 332 - -
Bva13g01083 360 Coils Coil 355 360 - -
Bva13g01083 360 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Bva13g01083 360 Gene3D NAC domain 24 188 IPR036093 GO:0003677|GO:0006355
Bva13g01083 360 PANTHER NAC TRANSCRIPTION FACTOR 56 1 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01083 Bva-Chr13 5296067 5297613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01083 5 360 NAC Transcription Factor Family AT1G61110 52.033 1.81e-110 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva13g01083 NAM 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01083 - - gmx:100797132 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01083 13 5296067 5297613 Bva14g01313 14 6461894 6463559 BWGD