Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01082 ATGGCTATTGTATTAAAGCAAAAGCTTTTCTGTCCCTTGGTTCTTGCTCTTTTGTTATCTATAAAGCCTGTTTTATCATCTAGACATAAGCAATATGGTGGTGGCGAGAGAAAGTTGAGCGCCGGGGGTAATGGGGATCTTGTTACTGACTTGCCTGGCCAGCCTCATGCTGATTTCAAGCACTATGCTGGGTATGTCACTGTGAATGAAACCAATGGAAGAGCACTTTTTTACTGGTTCTATGAGGCCATGAGCAAGCCAGATGAAAAACCATTGGTTTTGTGGCTTAATGGAGGTCCCGGGTGTTCTTCTGTGGGATATGGAGCAACACAGGAGATTGGTCCTTTTTTATTGGAAGCTGATGGAAAAAgccttaaatttaataacttctCATGGAATAGAGAAGCCAACATGCTATTCCTGGAATCACCTGTTGGAGTTGGCTTTTCCTACTCAAATAGAACCAGCGACTATGATATTCTGGGAGATGACTTCACAGCTAACGATGCTTACAATTTTCTGCACAATTGGTTCTTCAAATTCCCATCTTATAGAACGAGGAAATTTTATATAGCAGGGGAGAGCTATGCAGGAAAGTATGTACCTGAGCTGGCTGAGCTCATCCATGATAAGAACAAGGACCCTTCACTTCATATTAATCTCAAGGGTATCTTGTTGGGTAACCCGGAAACATCTGATGCCGAGGATAGGATAGGGTTTGTTGATTATGCTTGGAGCCATGCTGTGATATCTGATGAAACTTACAAgaaaattagacaaatttgTGACTTCAAGAGCAATAATACATGGAGTAATGAAGATTGCGATCAAGCTGTAGATGAAATAATGACACGGTACGATGAGATTGACATCTACAGCCTCTACACCTCTGTCTGCTTTGCCAAGACAGCGAGCTCAAATGACAATTCAACGCAAATGAAGCACTCATCTAAAAGGaagcGAAGAAACATGGGTGGTTATGACCCATGTATAGATGACTATgctaaaactttttataataGACCTGATGTTCAAAGGGCTCTTCATGTCACTGATGGTCACACTCTTAAGAATTGGAGTATATGCAACTATAATGTATATGATAATTGGCGTGAATCAAAGCCATCCATGATCCCAATTTACAAGAAGCTTATCTCAGCAGGACTTAGGATCTGGGTTTACAGTGGAGACACAGATGGTAGGGTACCAGTACTATCCACAAGATACAGCTTAAGTACTCTAGATTTGCCTATCACTAAGCCATGGAGATCTTGGTATCATGAGAAAGAGGTTAGTGGGTGGTATCAAGAATACGAGGGGCTTACATTTGCGACATTTAGAGGCGCTGGTCATGTAGTACCGTGTTTCAAACCAAGTAGCTCATTGGCATTCTTCAAGTCCTTCCTCCTTGGAGAAGCTCCACCTTCTACAAAATA 1436 0.4046 MAIVLKQKLFCPLVLALLLSIKPVLSSRHKQYGGGERKLSAGGNGDLVTDLPGQPHADFKHYAGYVTVNETNGRALFYWFYEAMSKPDEKPLVLWLNGGPGCSSVGYGATQEIGPFLLEADGKSLKFNNFSWNREANMLFLESPVGVGFSYSNRTSDYDILGDDFTANDAYNFLHNWFFKFPSYRTRKFYIAGESYAGKYVPELAELIHDKNKDPSLHINLKGILLGNPETSDAEDRIGFVDYAWSHAVISDETYKKIRQICDFKSNNTWSNEDCDQAVDEIMTRYDEIDIYSLYTSVCFAKTASSNDNSTQMKHSSKRKRRNMGGYDPCIDDYAKTFYNRPDVQRALHVTDGHTLKNWSICNYNVYDNWRESKPSMIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSTLDLPITKPWRSWYHEKEVSGWYQEYEGLTFATFRGAGHVVPCFKPSSSLAFFKSFLLGEAPPSTK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01082 478 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 475 IPR001563 GO:0004185|GO:0006508
Bva13g01082 478 ProSitePatterns Serine carboxypeptidases, serine active site. 191 198 IPR018202 GO:0004185
Bva13g01082 478 Gene3D alpha/beta hydrolase 43 301 IPR029058 -
Bva13g01082 478 PANTHER CARBOXYPEPTIDASE 10 475 - -
Bva13g01082 478 Gene3D - 377 471 - -
Bva13g01082 478 Gene3D - 330 368 - -
Bva13g01082 478 Pfam Serine carboxypeptidase 55 470 IPR001563 GO:0004185|GO:0006508
Bva13g01082 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Bva13g01082 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
Bva13g01082 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Bva13g01082 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 177 202 IPR001563 GO:0004185|GO:0006508
Bva13g01082 478 SUPERFAMILY alpha/beta-Hydrolases 45 472 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01082 Bva-Chr13 5287321 5291399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01082 335 472 Calmodulin-binding Proteins AT2G22960 31.655 1.30e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01082 K16297 - gmx:100805845 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01082 13 5287321 5291399 Bva14g01308 14 6423217 6427763 BWGD