Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01073 ATGGCGAACCAGTTATGTTACAACATAAATGTTACTTCGGCAAACGAGTTTTGGCAATCAGATACTGTATTTGAGTTCCACCTATCATATTTGGGAGGCCAAATCGCCCTAATCTTGTTCTTGAATcgcttattttattatgttctGAAACCACTTCGTCAGCCTCATTTTGTTGCAGAGATTCTTGTTGGTTTTCTACTAAGTAGAGATCTATTGGGGAGCCACCACTTGATTGAAAAGGTTTTCCCTGAAAATGGGGTTCTCACAGAAGAAGCCATAGCAAACATTGGCATAGCCTTCTATGTATTCTTAACAGGGATTGAGGTGAACCCAAATGCCATCCTACAAGCAAGAAAGAAGGCAACCTGCATTGCTATTGCTGGGGTTATCATTCCAATGGTGACCGGTTCCGCCATCTTTGGTTTATATCAATTATCTTCCAAAGCATCAGCAGCCTCTTCTAGCCAAGAGGACAATACATTCAAAGCTTATATCATATGGGCTTTAGCTATCAGTGCCACTGGATTTTCTGTCCTTGCTCGCGTCTTAGCCGATCTCAAGCTTCTCTATACTGGGCTAGGCCGAGCAGCATTGAGTGCAGCCTTGATCACTGGTCTCTACAACTGGTTTATGTTTCTGATATTGATTCCATTTGTCATGAATGGCTCCTCAGGCATCTACTCTGTGCTGAGTACTTTAGCTTTTCTTGTGGTTTGCTTCTGTGTCATCCGTCCTCTGCTTGTGAGGTTTATTGATCGCCAAACCGAACAAGAATCAATTGAACCTCAGCACTTGATGTGTGTGGTCGCAGGGCTTATTCTATGCACACATATTACAGACACTCTTGGCAGCCACTACGTTGTTGGGGCTtttgtgtttggattgatCATACCACATGGGAAATTTGCAGACTATATAATAGACAACCTAGACTACTTTGGAGCCAGCATCTTAGCGCCGGTGTTCTTTGTCTTGTGTGGCATGAGGATAGATTTTTCGAACCTTAAAACTCAGTGGTTCCTGTCCCTGGTGACCATTCTCTTGCTGTTTACCCTCAAGGTTTTTAGCACTACAGTGGCTGCATTATTCTTTGGTATGCCTACTCGAAATAGCATGGGTCTTGGATTGCTAATGAACACAAAGGGTGTCTTATCTGTGATAATCTTGAACATTGCTTTGGATGGAAAGATTTTGAGTTCTTCCTCGTATACACTCATGATGTCCGCTATTCTACTGATGACCATAGTAGTGTCTCCAATAATCAATTATGCATACAAGCCAAGGAAAATGTTCGCACAATACAAGCTAAGGACGGTTCAAAAGCTAAGAACTAACGTGGAGCTTCGACTTCAGGCTTGTGTCCACAACACTCGCCAAACCATGGGCATGGCCAGAATTTTTGAAGCTTTCCACAGCACCAAACTCTCCCCTTTACATGTCTTCGCCCTTTATCTCGTGGAAGTCACCGGCCACGCCACCTCCCTCGTTCTTGCTCACATGGAGGACTCCAGTTCTCACCTCAGATTCCAAAACCAGACAGAATCACAAGCAGAGTTTGAAAAGATAAGCAACACCTTTGATGCATTTGCAGAGGAAACTGATGCTACCAAAGTTGAGACCCACACTGCTTTCTCAAACTACTCAACTATTCATGAAGATGTACTCAACTTAGCAGAGGAGAGGCAGACATGCCTAATCCTCCTCCCTTTCCACCAACATTCAACAGCAGACGGGTCCCTGGAGACAACTAATGTTGCTCATAGGgacataaacataaatatctTGAATGATGCTCCATGTTCTGTTGGAATCTTGGTCGATCGCGGTCTTGGGACATTTTCCAAAGGTAACATGCATATTCTCATGGTGTTCATTGGTGGACCTGATGACCAGGAAGCCTTAGCTGTTGCTTGGAGAatggcgaggcactcaggagtTAAACTATCTGTGGTGAggattcttctttttgatGAAGCTGCAGAAGTGGACACTTCGGATCGTGCTGAATCTCATGGTCTGTTATCTGCAACAATGGATAATGAGCAGCAGAAAGATTTGGATGATGATTATGTGAGTTCTTTTAGACTCATGGCAGTGAACAATAATGATTCTATAACTTACTTTGAGAAGTATGCTCATAACAGCGAAGATATTTCTGCAATTCTCACTGAATTGGACAAAAACCAGtatgatttatatattgttgggcgaggaaaaggaagaaacttgTTGGCACTGTCAAAGTTATTGGAATGGAGTGATTACCCTGAACTTGGAGCTGTAGGAGACATATTGTCTTCGGACACATTCGGTTCGCGGTCCTCTGTGCTTGTTCTGCAACAATATGGGTCTGGCGTCGGGTATGGAACAAGCATACAGTATGCAGACAATATGAATCTAGACAAAGATGACCCTGATGAGAATCTTGGTGTCTACACAGATAACAGAGATAAGGTCTG 2459 0.4128 MANQLCYNINVTSANEFWQSDTVFEFHLSYLGGQIALILFLNRLFYYVLKPLRQPHFVAEILVGFLLSRDLLGSHHLIEKVFPENGVLTEEAIANIGIAFYVFLTGIEVNPNAILQARKKATCIAIAGVIIPMVTGSAIFGLYQLSSKASAASSSQEDNTFKAYIIWALAISATGFSVLARVLADLKLLYTGLGRAALSAALITGLYNWFMFLILIPFVMNGSSGIYSVLSTLAFLVVCFCVIRPLLVRFIDRQTEQESIEPQHLMCVVAGLILCTHITDTLGSHYVVGAFVFGLIIPHGKFADYIIDNLDYFGASILAPVFFVLCGMRIDFSNLKTQWFLSLVTILLLFTLKVFSTTVAALFFGMPTRNSMGLGLLMNTKGVLSVIILNIALDGKILSSSSYTLMMSAILLMTIVVSPIINYAYKPRKMFAQYKLRTVQKLRTNVELRLQACVHNTRQTMGMARIFEAFHSTKLSPLHVFALYLVEVTGHATSLVLAHMEDSSSHLRFQNQTESQAEFEKISNTFDAFAEETDATKVETHTAFSNYSTIHEDVLNLAEERQTCLILLPFHQHSTADGSLETTNVAHRDININILNDAPCSVGILVDRGLGTFSKGNMHILMVFIGGPDDQEALAVAWRMARHSGVKLSVVRILLFDEAAEVDTSDRAESHGLLSATMDNEQQKDLDDDYVSSFRLMAVNNNDSITYFEKYAHNSEDISAILTELDKNQYDLYIVGRGKGRNLLALSKLLEWSDYPELGAVGDILSSDTFGSRSSVLVLQQYGSGVGYGTSIQYADNMNLDKDDPDENLGVYTDNRDKV 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01073 819 PANTHER CATION/H+ EXCHANGER 3 17 792 - -
Bva13g01073 819 PANTHER CATION/H + ANTIPORTER 17 792 - -
Bva13g01073 819 Gene3D - 463 752 - -
Bva13g01073 819 Gene3D - 32 431 IPR038770 -
Bva13g01073 819 Pfam Sodium/hydrogen exchanger family 37 420 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01073 Bva-Chr13 5229167 5232489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01073 2 782 Antiporter Super Family AT2G13620 36.935 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01073 - - gmx:100804266 838.565