Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01069 ATGGTGATGGGAACGGAGGTGATGGGGACGTGGGACACATGGGAGGAGCTCCTCCTTGGCGGGGCGGTTCTCCGGCACGGGACCCGAGACTGGAACGTCGTTGCCGCGGAGCTCCGAGCCCGAACCATTTGCCCGTACACATTCACCCCCGaggtTTGTAAAGCCAAGTATGAAGACTTGCAGCAGCGTTATTCTGGGCGAACAGCTTGGTTTGAGGAgcttaagaagaaaagagtgGCAGAGCTCAAGAAAGCTCTTGAGCTGTCTGAAGACTCAATAGGGTCACTTAAATCAAAGCTTGAATCCCTCCAAGCTGATAAGAATGCAGAAAAAGATGATTGTTATGTTGGCAATGGCTCGGGTGGTCTAGAATCAGTGCCTTTGGAGAAATCGGAAAGAACTCAATCTTGGACGAAAGTGACATCAAAAGATGGGCTATCTGCTGGAAGTTTTACACATGAAACCAGGGCAAACTGGTCTTCTGAATGTCAGGCTCGGACAATGTCTAATGAAGAGATGGAAACAAAGCATGAAGTCTCGCAGTCTTCTGAGCAGGACAAGGTTTCAAACATGGATAGATTGGCGCATGCCATGTACGATGGACGAGGAGGGAGtttaaggaaaagaagagggaagaggaagaggaaggaTTGTAGCAAAAGTTTCAAGGAAGCTAGTGTTGGAGAAAGTGACTTCGTCGATTCAGTTGATGTTGTCTTCCAAAGTAAAGAAAAGTCTATGAGCAACTGTGGTGAAATCGCCAAGTCTATTGGCGAAGATGATCAAACCAAGAGCTTGAAGAAGGATGCAACGGAAGAGTTCATGGAAATCTTAAATTCCATCATGGAGAGTAAAGGGGCATCTGCATTCCGTCGCAGACTTGATAGCCAGAAGAGAGGGAGGTACAAGAAAATGATCCGACAACACATGGACTTTGATACTTTAAGGTCAAGAATAAGCAACCAAACGATTAAGTCAGTGAAGGAACTCTTCCGGGACTTACTGCTACTAGCTAACAATGCTTTAATCTTCTATTCCAAGACCACAAGAGAATATAAATCTGCTCTACTTCTAAGAGAGGCTGTGACCAAAAAATTGAGGGAGAACTCTAAGGGTTCTAGCACCAAACTTGTTAGCCAAGCTAACAACCCTATCAAATTACCAGTAAATTGTCCTCCTGTGAAACCCAGAAGTGTGCGGCCCGGGAATCGAAAGATTGCAGCAAAGGCGGCTGGTGTGAGCAATTCTGCTTCTGGGGTCTCTCAAGGAGCCAAGAAACCAGCGAAAGCTGATTCTCCATCTTCAGTGGAATCCTTGGCTGTCAAGAAGAAAGGGTTTGGTAGACCGAAGAAGGTTGGCCGGGGTGGCGCTTCACCTCCATTAAAGGGGAAGAAAAGAGTTAGAACAAGGTG 1412 0.449 MVMGTEVMGTWDTWEELLLGGAVLRHGTRDWNVVAAELRARTICPYTFTPEVCKAKYEDLQQRYSGRTAWFEELKKKRVAELKKALELSEDSIGSLKSKLESLQADKNAEKDDCYVGNGSGGLESVPLEKSERTQSWTKVTSKDGLSAGSFTHETRANWSSECQARTMSNEEMETKHEVSQSSEQDKVSNMDRLAHAMYDGRGGSLRKRRGKRKRKDCSKSFKEASVGESDFVDSVDVVFQSKEKSMSNCGEIAKSIGEDDQTKSLKKDATEEFMEILNSIMESKGASAFRRRLDSQKRGRYKKMIRQHMDFDTLRSRISNQTIKSVKELFRDLLLLANNALIFYSKTTREYKSALLLREAVTKKLRENSKGSSTKLVSQANNPIKLPVNCPPVKPRSVRPGNRKIAAKAAGVSNSASGVSQGAKKPAKADSPSSVESLAVKKKGFGRPKKVGRGGASPPLKGKKRVRTR 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01069 470 MobiDBLite consensus disorder prediction 120 142 - -
Bva13g01069 470 Pfam Bromodomain 276 355 IPR001487 GO:0005515
Bva13g01069 470 SMART bromo_6 267 371 IPR001487 GO:0005515
Bva13g01069 470 MobiDBLite consensus disorder prediction 393 470 - -
Bva13g01069 470 Gene3D - 260 378 IPR036427 GO:0005515
Bva13g01069 470 ProSiteProfiles Bromodomain profile. 282 352 IPR001487 GO:0005515
Bva13g01069 470 Coils Coil 79 113 - -
Bva13g01069 470 SUPERFAMILY Bromodomain 266 368 IPR036427 GO:0005515
Bva13g01069 470 PANTHER BROMODOMAIN PROTEIN 3 470 - -
Bva13g01069 470 CDD SANT 10 57 IPR001005 -
Bva13g01069 470 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 3 470 - -
Bva13g01069 470 CDD Bromodomain 271 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01069 Bva-Chr13 5201491 5205133 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva13g01069 Bromodomain 6.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01069 - - gmx:100804245 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01069 13 5201491 5205133 Bva14g01294 14 6339547 6343239 BWGD