Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01034 atgggTGATGAAGGGGGTGTTAGGGAAGCTAAAGTAGAGCAGAACTCACCGGAAACGTCCACCGGAGATTCCAGTCTCGGGCGAGCCATCGAGTTTATATCTTCGTTGATTTCTCTCTCCCATTCAGTCAGGGTCTTTGCTGCAAAATGGCAACTGATTCGGATCAAACTCGAGGAGCTCCATTCTGGGTTAATCGCCGCCGAGGACTGCGATTCCGGTCAGAACCCATCACTCTCCAGCTTAGTTCCTTCAATACTTGTTACAGTCAACGAGTGCTACGATCTAGCTCGTCGTTGCGTCGATCTTTCTTACAGTGGGAAGCTCCTGATGCAGAGCGATTTGGATGTGATATTTGCCAAGTTCGATCGCCATGTGAAGAAGCTTTCAGAAATATACACGACGGGTATTTTGACTTCTAGGTACGCTCTCGTTGTCTCTAGACCTAGCCTTGGGGCTTCTAAAGATGATATGAGGTTCTATATGAGGGACTTGCTAACTAGAATGAAGGTTGGGGATATGGGCATGAAAAGGCAAGCTTTGATCAATCTGCACGAGGTCGTGGTTGAAGATGAGAAATATGTGAAGGTGATTGTGGAAGTGGGTGACATTGTTCATGTCTTGGTGAATTTTCTCGATTCACCAGAGTTGGAAATCCAAGAAGAATCTGCCAAAGTAGTTTCTGTGGTTGCTGGTTTTGATTCCTACAAAGGGGTTTTGATCGGAGCTGGGATTATTGCGCCGTTGATTCGGGTTTTGGAATTTGGAAGTGAGGGAGGGAAGGTAGGAGCTGCAAGGTGTTTGCAGAAATTAACTGAGAATTCAGATAATGCTTGGTCAGTTTCTGCTCATGGGGGAGTCACTgccttattaaaaatatgctcTAATGGAGATTCTAAAGGAGAATTAGTTGGTCCTGCTTGTGGGGTTTTGAGAAATCTTGTAGGtgttgaagaaataaagagaTTTATGGTTGAAGAAGGTGCTGTTTCCACATTTATCAAGCTTGTGAGATCCAAGGAGGAAGCAATTCAGGTAAATTCTATAGAGTTCCTTCAAAATATTGCCTCCGGAGATGAATCAACTAGGCAATTGGTAGTTAGAGAAGGTGGAATTCGCATATTGTTGCGTGTTTTGGAGCCTAAATGGTCGTATCCTTCTAAAACAAGAGAGATAGCAATGAGAgctattgaaaatttatgtttttcttcatcTAGTTCTGTAAGTATGTTGATGAATTATGGGTTTGTGGATCAACTTCTATATTATATTCGAAACGGGGAAGTTTCCATTCAAGAACTGGCTCTGAAAGTGGCATTTAGATTATGCGGGACATCAGAGGAAGCAAAGAAAGCAATGGGTGATGCAGGATTTATGCCTGAATTTGTCAAGTTCCTAAATGCAAAATCATTTGAAGTTCGTGAAATGGCTGCCGAAGCACTATCTGGCTTGGTTTTGGTAcctaaaaatagaaagaaatttgtgCTGGACGACCACAGCATTGCTCTTCTTCTAAAATTGCTTGACCCAGAAGAGGGAAATTCAGGTAACAAAAAGTTCTTGATCTCTATATTAATGTCATTAACAAGTTGCAACAGTGGGAGAAAAAAGATTGTCAATTCTGGTTATGCCAAAAACATAGAGAAACTCGCAGAAGCTGAAGTTTCTTCTGATGCCAAGAAACTTGTGAAGAAGCTATCCACAAACAGGTTCCGCAGTATGTTAAGTGGAATCTGGCACCACCACTCATG 1748 0.4073 MGDEGGVREAKVEQNSPETSTGDSSLGRAIEFISSLISLSHSVRVFAAKWQLIRIKLEELHSGLIAAEDCDSGQNPSLSSLVPSILVTVNECYDLARRCVDLSYSGKLLMQSDLDVIFAKFDRHVKKLSEIYTTGILTSRYALVVSRPSLGASKDDMRFYMRDLLTRMKVGDMGMKRQALINLHEVVVEDEKYVKVIVEVGDIVHVLVNFLDSPELEIQEESAKVVSVVAGFDSYKGVLIGAGIIAPLIRVLEFGSEGGKVGAARCLQKLTENSDNAWSVSAHGGVTALLKICSNGDSKGELVGPACGVLRNLVGVEEIKRFMVEEGAVSTFIKLVRSKEEAIQVNSIEFLQNIASGDESTRQLVVREGGIRILLRVLEPKWSYPSKTREIAMRAIENLCFSSSSSVSMLMNYGFVDQLLYYIRNGEVSIQELALKVAFRLCGTSEEAKKAMGDAGFMPEFVKFLNAKSFEVREMAAEALSGLVLVPKNRKKFVLDDHSIALLLKLLDPEEGNSGNKKFLISILMSLTSCNSGRKKIVNSGYAKNIEKLAEAEVSSDAKKLVKKLSTNRFRSMLSGIWHHHS 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01034 582 MobiDBLite consensus disorder prediction 1 24 - -
Bva13g01034 582 Pfam Armadillo/beta-catenin-like repeat 446 483 IPR000225 GO:0005515
Bva13g01034 582 SUPERFAMILY ARM repeat 163 562 IPR016024 -
Bva13g01034 582 SMART arm_5 190 231 IPR000225 GO:0005515
Bva13g01034 582 SMART arm_5 273 315 IPR000225 GO:0005515
Bva13g01034 582 SMART arm_5 358 401 IPR000225 GO:0005515
Bva13g01034 582 SMART arm_5 232 272 IPR000225 GO:0005515
Bva13g01034 582 SMART arm_5 316 356 IPR000225 GO:0005515
Bva13g01034 582 SMART arm_5 445 485 IPR000225 GO:0005515
Bva13g01034 582 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 284 328 IPR000225 GO:0005515
Bva13g01034 582 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 327 369 IPR000225 GO:0005515
Bva13g01034 582 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 8 579 - -
Bva13g01034 582 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 8 579 - -
Bva13g01034 582 Gene3D - 161 571 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01034 Bva-Chr13 5002288 5004564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01034 98 434 U-box Gene Family AT2G23140 27.059 6.49e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01034 - - gmx:100809382 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01034 13 5002288 5004564 Bva14g01261 14 6163249 6165659 BWGD