Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01019 atgaagaagtgCGAGCTCTGCAGCTCACCTGCAAAACTTTTCTGTGAATCAGATCAAGCTTGTCTCTGCTGGGAATGCGATGCCAGAGTTCACGGTGCTAACTTTCTGGTCACCAAGCATTCCAGAACTCTGCTATGCCATGTCTGTCAATCGCTAACGCCGTGGCACGGTTCTGGGCCCAGGTTTGTGCCCACAGTCTCCGTTTGTAATCATTGCATTGCCAACAAGAATGAGAACCATGATGATGATCGCGAcgaggatgatgatgatgtcGGCGGCGACAATGATGAAGATGACGAGGAAAATCAGGTGGTTCCATGGGCAATCACGCCGCCACCGCCGGCTTCGAGTTCTTCTAATAGTTCATCTTCTTTCTA 377 0.4642 MKKCELCSSPAKLFCESDQACLCWECDARVHGANFLVTKHSRTLLCHVCQSLTPWHGSGPRFVPTVSVCNHCIANKNENHDDDRDEDDDDVGGDNDEDDEENQVVPWAITPPPPASSSSNSSSSF 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01019 125 MobiDBLite consensus disorder prediction 82 103 - -
Bva13g01019 125 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 122 - -
Bva13g01019 125 MobiDBLite consensus disorder prediction 75 125 - -
Bva13g01019 125 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Bva13g01019 125 SMART bboxneu5 1 45 IPR000315 GO:0008270
Bva13g01019 125 CDD Bbox1_BBX-like 3 45 - -
Bva13g01019 125 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 1 122 - -
Bva13g01019 125 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01019 Bva-Chr13 4919393 4920010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01019 2 114 C2C2-CO-like Transcription Factor Family AT5G54470 47.727 9.95e-34 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva13g01019 zf-B_box 8.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01019 - - cam:101492786 161.384