Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01017 ATGGGATTATGCAGTTACCAGAGATTGTTCTCTATTTTGATCCCATTTTGTTTCTCTTGCTTAGATTTTAGTGCTGCCATAGACACCATAACATCAACTCAATTCCTCAAGGATCCTCAAACTCTGTCCTCTAATGGCACACGATCAGAACTCGGTAAAGGGAGAGATATGACCATTATCATTAAAGTTACAGTTATAATAGGAACAATTATCCTTGTCACCTGTGCATATTTCCTATGGAAATGGACTGGTAGACACTCCAGGACTGATAAAAAAAGTGACAACAGCATACTTGGAGAATTGTCAGAACAGGAGCTATTGcaatatgattttgaaaagCTTGCAACTGCTACAAACAACTTTCATTCATCTAATAAACTTGGGCAGGGTGGTTTTGGTCCAGTATACAAGggAAAATTGCAAGATGGTCAAGAAATAGCTGTTAAAAGACTTTCTACAGCATCTAAACAAGGGTTAGAAGAGTTCAAGAATGAGGTTATTGTGATTTCTAAGCTTCAACATCGTAATCTAGTAAAACTATTTGGTTGCTGCATTGAAAGAGATGAAAAGATGTTGATCTATGAATACTTGCCAAATAAAAGTCTGGATGCATTTGTCTTTGATCCACTTGAATattttggTATGGCTAAAATCTTTGGAGGGGATGAAGATCACGCCAACACCCGAAGGATTGTAGGAACTTATGGTTATATGGCTCCTGAATATGCTATGGAAGGATTATTTTCAGAGAAATCAGATGTCTTTAGTTTTGGAATCTTACTACTAGAAATTGTTAGTGGAAGAAGAAACTCTAGCTTTTATAACAACGAGGAGTCTCTCGGCCTTCTAGGAATTGCTTGGAAGTTAtggaatgaagaaaacatTGTGACTTTAATAGATCCAGAACTACATGAACCTGGCCATGAGAAGGATATTTTGAGGTGCTTACAGATAGGACTGATTTGTGCACAAGAACTTGCAAGAGAAAGGCCAAATATGGCCACTGTAATTTCCATGCTTAACAGTGAGATTGTTGATCTTCCATCTCCAAGGCAACCTGCATACACCGAGAGGCAGAATATGATGAGTTCAGAGTCCACTGGAGAAAGAAGCCATGGGTTGCACTCCAACAACAGTGTCAGTATTACAGAGATCCAAGgaagata 1166 0.3705 MGLCSYQRLFSILIPFCFSCLDFSAAIDTITSTQFLKDPQTLSSNGTRSELGKGRDMTIIIKVTVIIGTIILVTCAYFLWKWTGRHSRTDKKSDNSILGELSEQELLQYDFEKLATATNNFHSSNKLGQGGFGPVYKGKLQDGQEIAVKRLSTASKQGLEEFKNEVIVISKLQHRNLVKLFGCCIERDEKMLIYEYLPNKSLDAFVFDPLEYFGMAKIFGGDEDHANTRRIVGTYGYMAPEYAMEGLFSEKSDVFSFGILLLEIVSGRRNSSFYNNEESLGLLGIAWKLWNEENIVTLIDPELHEPGHEKDILRCLQIGLICAQELARERPNMATVISMLNSEIVDLPSPRQPAYTERQNMMSSESTGERSHGLHSNNSVSITEIQGR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01017 388 MobiDBLite consensus disorder prediction 348 388 - -
Bva13g01017 388 Pfam Protein tyrosine and serine/threonine kinase 123 206 IPR001245 GO:0004672|GO:0006468
Bva13g01017 388 Pfam Protein tyrosine and serine/threonine kinase 213 339 IPR001245 GO:0004672|GO:0006468
Bva13g01017 388 MobiDBLite consensus disorder prediction 353 388 - -
Bva13g01017 388 Gene3D Phosphorylase Kinase; domain 1 82 196 - -
Bva13g01017 388 SUPERFAMILY Protein kinase-like (PK-like) 109 368 IPR011009 -
Bva13g01017 388 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 53 210 - -
Bva13g01017 388 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 213 387 - -
Bva13g01017 388 ProSiteProfiles Protein kinase domain profile. 121 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01017 388 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 53 210 - -
Bva13g01017 388 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 213 387 - -
Bva13g01017 388 Gene3D Transferase(Phosphotransferase) domain 1 201 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01017 Bva-Chr13 4909631 4912814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01017 85 388 Receptor kinase-like Gene Family AT4G11530 41.322 2.20e-88 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva13g01017 PK_Tyr_Ser-Thr 3.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01017 - - cam:101513672 441.425