Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01013 ATGAGACAGTATCCTGAAGGTGGTGGGCAAGATCTCTATGTCAGATTAGCAGCTTCTGATGTAGATGATATAGGATCTGCTGGTGGTTCTCACAAGGCAAAGGATATTGTTAAGGTTGTGGGCATTTCAGTTGCTGCAGCTATTGTAATTTTGGCATTGgttttctatttcttatgccagaagaagaaattgaaaagaatattaacAGGGAAGACAGAACTAACAGATCCAGTTTCTATTGAGAGAAGCCAGGACTTGCTGTTCGCTGAGGTGGTATTTTCAAGTAATAGAGAACAATCTGCTGAAAGGAAGTTAGAGGAACTAGAGTTGCCATTATTTGACTTCAATACCTTAACAATGGCTACAAACAATTTCtctgaagaaaataaactgGGACAAGGTGGCTTTGGTATTGTTTACAGGGGTAAGTTGGTGGAAGGCCAACAAATTGCTGTGAAGAGGCTATCAAGAAACTCTGGGCAAGGAACTGAAGAATTCAAGAATGAGGTCAAGTTAATTGTCAAGCTTCAACACCGGAATCTTGTTCGCCTGTTTGGTTGCTGCGTTGAGATGGAAGAGAAGATGCTGGTTTATGAGTACATGGAAAATAAAAGCCTtgattcctttttatttgATAAGGTGAAAAGATCCTCATTAGATTGGAAAAAGCGGTTCAACATTATATGTGGAATTGCTAGAGGGCTTCTTTATTTGCATCAAGATTCAAGATTTAAGATTATCCATAGGGATCTTAAAACAAGCAACATTCTACTTGACAAAGAAATGAATCcaaaaatatcagattttggGATGGCTAGAATTTTTGGCACAGACCAAACAGAAGCTAATACATTGAGAGTTGTTGGAACATATGGCTATATGTCTCCTGAATATGCAATGGATGGGATTTTTTCAGTGAAATCTGATGTCTTTAGTTTTGGAGTTTTAGTGTTGGAGATTATAAGCGGTAAGAAGAACCGAGGATTCTATCATGCAAATAAGGATTTGAATCTTCTAGGGCATGCTTGGAGGCTATGGAAAGAAGGAAATGCTTTGGAACTAATAGATTCATCGTTTGGAGATTCATATTCACCACCTGAAGTCCTCAGATGCATACAGATAGGGCTCTTATGCGTCCAAGAGAGGGCAGAAGACAGGCCAACAATGTCTTCTGTGGTCTTGATGCTGAGCAGTGAAAATGCAACAATGGCACAGCCTAGAATCCCTGGGTTTTGCCTTGGAAGGGCTCCTAATGAGACTGATTCTTCTTCAAGCAAGCAAGAAGAATCATGCACTGTGAACCAAGTCACAGTCACAATGCTAGATGCTAGGTA 1334 0.3763 MRQYPEGGGQDLYVRLAASDVDDIGSAGGSHKAKDIVKVVGISVAAAIVILALVFYFLCQKKKLKRILTGKTELTDPVSIERSQDLLFAEVVFSSNREQSAERKLEELELPLFDFNTLTMATNNFSEENKLGQGGFGIVYRGKLVEGQQIAVKRLSRNSGQGTEEFKNEVKLIVKLQHRNLVRLFGCCVEMEEKMLVYEYMENKSLDSFLFDKVKRSSLDWKKRFNIICGIARGLLYLHQDSRFKIIHRDLKTSNILLDKEMNPKISDFGMARIFGTDQTEANTLRVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVLEIISGKKNRGFYHANKDLNLLGHAWRLWKEGNALELIDSSFGDSYSPPEVLRCIQIGLLCVQERAEDRPTMSSVVLMLSSENATMAQPRIPGFCLGRAPNETDSSSSKQEESCTVNQVTVTMLDAR 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01013 444 Gene3D Phosphorylase Kinase; domain 1 98 200 - -
Bva13g01013 444 PANTHER - 1 443 - -
Bva13g01013 444 Pfam Protein tyrosine and serine/threonine kinase 128 394 IPR001245 GO:0004672|GO:0006468
Bva13g01013 444 Pfam Domain of unknown function (DUF3403) 398 444 IPR021820 GO:0004674
Bva13g01013 444 ProSiteProfiles Protein kinase domain profile. 125 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01013 444 Gene3D Transferase(Phosphotransferase) domain 1 201 407 - -
Bva13g01013 444 SUPERFAMILY Protein kinase-like (PK-like) 106 396 IPR011009 -
Bva13g01013 444 CDD STKc_IRAK 131 396 - -
Bva13g01013 444 ProSitePatterns Protein kinases ATP-binding region signature. 131 153 IPR017441 GO:0005524
Bva13g01013 444 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 443 - -
Bva13g01013 444 Pfam Receptor serine/threonine kinase 80 115 IPR022126 GO:0004674
Bva13g01013 444 SMART serkin_6 125 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g01013 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01013 Bva-Chr13 4879668 4885967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01013 113 444 Receptor kinase-like Gene Family AT4G11530 59.644 5.07e-144 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva13g01013 PK_Tyr_Ser-Thr 3.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01013 - - aprc:113860154 694.886