Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01012 atgaagataattttatccaaAGAGTTTTTCAATCCATTAACAgttttgcttctctttctcGTTTATCCTTTCTGCTGCAACTCCCTTGATACCATAACTCCCAACCGTCCTCTCAGAGACAGAGACGGTGACGTTTTGGTATCCGACAAAGGCAGCTTCGCCCTTGGTTTCTTCAGCCCTGTCAATTCTACAAACCGGTATGTTGGAGTTTGGTATCAAAAGGTTTCATTACAAACCGTTGTCTGGGTTGCTAATAGGGATACTCCTCTCACTGACACCTCTGGTGTACTATCCATCAACAGCCGTGGAAACCTCGTCATCCTCAACAATCAAACCAGAAGCGAGAAACCCATTTGGTCTGCTAATGGTTCTGTCCCCGTCTTTTCCCCTAATACATCAGCTAAGCTTCTAGACACTGGGAACTTCGTTTTGGTTGAGAGTGGAAGCCAAAACATGATATGGCAGAGTTTTGATTACCTTAGTAACACTATGCTACCGTTTATGAAACTCGGGTTGGACCGGAAAACAGGTTTGAACCGGTTTCTAACATCCTGGAGATCTTCCATTGACCCAGGAACTGGGAACTTGACCTACAGGATTGATCCTACAGGGGTTCCTCAAATGTTCTTGTATAAGAACGGGGCTCCACTTTGGCGGGTCGGGTCTTGGACGGGTCAGAGATGGAGCGGTGTACCCGAGATGACTAACAACTTCATATTCAACGTTAGCTACGTGGACAATGCTAACGAGGTTAGCATTATGTATGGAGTGACAGACCCTAGGGTTTTCTCAAGAATGGTGGTGGAAGATACCGGGCATGTGAGACGATCCACGTGGCAAGCTCAAGAACATAGGTGGTTCGAATTTTGGTATGACCCGAAAGAAGACTGTGACAACTACAAGCGATGCGGGGCAAATAGCAATTGTAACCCCTACATTGAGGATCAGTTTGAGTGTGATTGTTTGCCCGGATTTGAACCCAAGTTCTCGCGAGAATGGTTTCTTCGAGATGCATCGAGTGGGTGTGTAAGAAATCGTAACGTGTCCACGTGTCAAAGTGGGGAGGGGTTTGTTCAGGTGGCACGTGTGAAGACACCAGACACCTCTAAGGCACGCGTGGATACAAGTTTGAGCTTGAAAGCGTGCGAAGAGAAGTGTTTAAAGGATTGTTCATGTGCAGCTTATACCTCTGCGGATGAAAGAACAGGGAGTGGGTGTTTGACATGGCATGGAGATATGGTGGATACAAGAACATACACAAGTGCAGgacaaaatttatacataCGTGTGGATGCACGTGAACTagCTAAATATGCAAAGAAGCAACATGGTCCTCTCGGCGTGAAGGGGATGATAGCAGTTATAGTGGTGTCTGTTTTTGTGATCCTGCTTCTTATCGTTTATATTGTACATTGGTTCGTAAGGAGGAAAAAACAAGTGAGGAGAAAGTATGGCAAATATCCATCTACCATTGATTTTAATGACTCTCCAAGCATAGAAGATCTTCAAGGCAGACAGAATTCAGACTTACCTTTCTTTGATCTAAGAGACATTGTTGAAGCAACAGACAATTTTTCCCCAGATAACAAGCTTGGACAAGGTGGTTTTGGTTCTGTTTACAAGGGTTTGTTAAGTAATGGAATGGCAATAGCAGTGAAGAGACTGTCAAGGATATTTGGTGGGGAGCAAATTGAAGCAAACACAAACCGTGTCGTTGGAACCTAtgGTTACATGTCACCGGAGTATGCAATGGAAGGaattttttcaatcaaatctgatatatatagttttggagTTTTAATTCTAGAGATCATCACCGGAAGAAAGAATAGTGGTCATTATGAAGATATTACCTCCTCCACTTTGGTTGGACATaTATGGGATCTGTGGAGAGAAGGCAGAGCCTTGGAGATTGTTGATCCATCAATGGGTGACACATGCCTTGAACATGAAGTCCTAAGATGCATCCAAATTGGGCTACTATGTGTACAAGATTATCCAACAGACAGGCCAACTATGTCAGTAGTTATTTCTATGTTGGGTAATGACACGACTCTTCCTACTCCCAAACAACCAGTATTCATTTTCAAGAGATATACTCACACCAGTACAGACCAATCAACAAGTGAAGGGATGAATTCAGTAAACGGGGTGAGTATTACTATGATAGAAGCCCGCTG 2180 0.4243 MKIILSKEFFNPLTVLLLFLVYPFCCNSLDTITPNRPLRDRDGDVLVSDKGSFALGFFSPVNSTNRYVGVWYQKVSLQTVVWVANRDTPLTDTSGVLSINSRGNLVILNNQTRSEKPIWSANGSVPVFSPNTSAKLLDTGNFVLVESGSQNMIWQSFDYLSNTMLPFMKLGLDRKTGLNRFLTSWRSSIDPGTGNLTYRIDPTGVPQMFLYKNGAPLWRVGSWTGQRWSGVPEMTNNFIFNVSYVDNANEVSIMYGVTDPRVFSRMVVEDTGHVRRSTWQAQEHRWFEFWYDPKEDCDNYKRCGANSNCNPYIEDQFECDCLPGFEPKFSREWFLRDASSGCVRNRNVSTCQSGEGFVQVARVKTPDTSKARVDTSLSLKACEEKCLKDCSCAAYTSADERTGSGCLTWHGDMVDTRTYTSAGQNLYIRVDARELAKYAKKQHGPLGVKGMIAVIVVSVFVILLLIVYIVHWFVRRKKQVRRKYGKYPSTIDFNDSPSIEDLQGRQNSDLPFFDLRDIVEATDNFSPDNKLGQGGFGSVYKGLLSNGMAIAVKRLSRIFGGEQIEANTNRVVGTYGYMSPEYAMEGIFSIKSDIYSFGVLILEIITGRKNSGHYEDITSSTLVGHIWDLWREGRALEIVDPSMGDTCLEHEVLRCIQIGLLCVQDYPTDRPTMSVVISMLGNDTTLPTPKQPVFIFKRYTHTSTDQSTSEGMNSVNGVSITMIEAR 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01012 726 SUPERFAMILY Protein kinase-like (PK-like) 509 705 IPR011009 -
Bva13g01012 726 PANTHER - 13 557 - -
Bva13g01012 726 PANTHER - 555 723 - -
Bva13g01012 726 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 191 IPR036426 -
Bva13g01012 726 ProSiteProfiles Bulb-type lectin domain profile. 29 157 IPR001480 -
Bva13g01012 726 Gene3D Transferase(Phosphotransferase) domain 1 547 688 - -
Bva13g01012 726 Pfam D-mannose binding lectin 79 186 IPR001480 -
Bva13g01012 726 CDD TM_EGFR-like 451 481 - -
Bva13g01012 726 PIRSF SRK 2 558 IPR024171 GO:0004674
Bva13g01012 726 PIRSF SRK 555 726 IPR024171 GO:0004674
Bva13g01012 726 Pfam PAN-like domain 351 416 IPR003609 -
Bva13g01012 726 ProSiteProfiles EGF-like domain profile. 293 331 IPR000742 -
Bva13g01012 726 ProSitePatterns Protein kinases ATP-binding region signature. 531 553 IPR017441 GO:0005524
Bva13g01012 726 Pfam Protein tyrosine and serine/threonine kinase 574 678 IPR001245 GO:0004672|GO:0006468
Bva13g01012 726 SMART ntp_6 352 430 IPR003609 -
Bva13g01012 726 Pfam S-locus glycoprotein domain 218 329 IPR000858 GO:0048544
Bva13g01012 726 Gene3D - 24 157 IPR036426 -
Bva13g01012 726 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 13 557 - -
Bva13g01012 726 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 555 723 - -
Bva13g01012 726 SMART blect_4 37 160 IPR001480 -
Bva13g01012 726 ProSiteProfiles PAN/Apple domain profile. 351 431 IPR003609 -
Bva13g01012 726 CDD B_lectin 42 159 IPR001480 -
Bva13g01012 726 CDD PAN_AP_plant 349 430 - -
Bva13g01012 726 Pfam Domain of unknown function (DUF3403) 682 726 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01012 Bva-Chr13 4874146 4877712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01012 555 709 Receptor kinase-like Gene Family AT4G23150 54.717 2.54e-49 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva13g01012 PK_Tyr_Ser-Thr 7.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01012 - - gmx:100812814 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01012 13 4874146 4877712 Bva14g01214 14 5888401 5893304 BWGD