Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g01009 ATGGCAGAGGAGTTTCAAGCAGAGATTTGTGGTGGGAATTGGtggaatattaatattaattcaacaaGAGGTATCTTCCCTCTGAGCACAGCCCCTTGTTCCATGGCAGCCAATGAAGCAGGATTAAGCTATGGCACTTGGCAAACAGAGTTTGAGGATTTGAAGCCTGCCAGCACTTGTGCTGAAGAAGAGACTAATAACTTTGTTTCTTCGAATAGCTCGCTGTGTTTTCTGGATTTGCAGAAGGCATATGAGAGTGAATCAGCAAGTGGTAGTAGTGGAATCTTGATTGATTCCACCTTGCAAATGATGGGTTTTGGCCTCTCATCACCATCAACTTCATCATCAGATTGGAATCACTATCTGCTTAGTGGCAGACCGGAGAGGAATTTCCATTCTTTGCTTCAAGAAGAAACGATTATAGATTCTTCTTCTCCAACAAAGAGCTTCACATCTTGTGGAGGAGCTCAAGTTTCCACCATTAATGATTCTTTGAAGCCAATGAACCAAGAATTTCCCTTGGATCAGCAAAATCTGAGTTCTGGGCCTTCAACAGTGACCTTCCCAATTGATTCTTCAGCTTCATATGGGTTTCCTGCAAGTTTGATACAAAGTCTATATGAGCCTGAGGTTCATCAGCAACAACCACAGCATTCACTTTTCACCAACCGGTCTATGGCTTACTCATCATCTACAGGAAACTATGTCACAAACTCCTCCTCCGATGATCTTTCACCAACTTGGTCTAATAAAGTCTCTCCCTTTTTGAAACCAAAGCAGCAGCTTGGTGGGCTGCACTTTTCCAACAATACCCCTTTCTGGAATGCTTCTGCTGATGCAGTGAACGACTTAAGAGCACGTGTTTTTGGTTCATCACAGCCTCAATATGATCATCAGGCTACAAAGTTTGATGAGAAGCACAATTGCTCAAATCACACAACCAAGGCCAAGAGTGAAGAAGCTGTTTCAGACTCGGCATCCACAATGAAGAAAAGTAAGGTTTGTGAACCTGCATTCAAGAGGCCGAGAATTGAAACTCCATCACCATTACCAACTTTTAAGGTTCGGAAAGAGAAGATGGGGGACCGAATTACTGCTCTTCAGCAATTGGTTTCACCTTTCGGAAAGACCGACACAGCTTCCGTTCTCCACGAAGCCATTGAGTACATCAAGTTCCTTCATGACCAAGTCAATGTTTTGAGTACTCCATATTTGAAAAATGGAGCTCCCATCCAACACCAAGAGGTTAATGATAACGTGAAGGAGTCAGAAGAGTCAAAACAAGATTTAAGAAGCCGAGGGCTATGCTTGGTACCGATTTCAAGCACATTCCCTGTAGCAACCGAGACCGCCGGTGATTTCTGGACACCAACATTTGGAGACACACTCATCaggta 1397 0.4295 MAEEFQAEICGGNWWNININSTRGIFPLSTAPCSMAANEAGLSYGTWQTEFEDLKPASTCAEEETNNFVSSNSSLCFLDLQKAYESESASGSSGILIDSTLQMMGFGLSSPSTSSSDWNHYLLSGRPERNFHSLLQEETIIDSSSPTKSFTSCGGAQVSTINDSLKPMNQEFPLDQQNLSSGPSTVTFPIDSSASYGFPASLIQSLYEPEVHQQQPQHSLFTNRSMAYSSSTGNYVTNSSSDDLSPTWSNKVSPFLKPKQQLGGLHFSNNTPFWNASADAVNDLRARVFGSSQPQYDHQATKFDEKHNCSNHTTKAKSEEAVSDSASTMKKSKVCEPAFKRPRIETPSPLPTFKVRKEKMGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVNVLSTPYLKNGAPIQHQEVNDNVKESEESKQDLRSRGLCLVPISSTFPVATETAGDFWTPTFGDTLIR 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g01009 465 MobiDBLite consensus disorder prediction 310 329 - -
Bva13g01009 465 CDD bHLH_AtbHLH_like 350 401 IPR045239 -
Bva13g01009 465 Coils Coil 413 433 - -
Bva13g01009 465 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 354 410 IPR036638 GO:0046983
Bva13g01009 465 Gene3D - 354 407 IPR036638 GO:0046983
Bva13g01009 465 PANTHER TRANSCRIPTION FACTOR BHLH123 60 454 - -
Bva13g01009 465 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 344 393 IPR011598 GO:0046983
Bva13g01009 465 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 60 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g01009 Bva-Chr13 4850913 4854110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g01009 1 465 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 39.588 2.25e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g01009 - - gmx:100805087 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01009 13 4850913 4854110 Bva14g01197 14 5799069 5802123 BWGD