Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00992 ATGTATTACTGTGTGCCTTGGGCTCAAtcgaagaagaggaagaagaactgcaaacaaaacaaagctaAGAAGGAGGAGAAAGAACACAAGGAATCAAATCAGACGAGTAAGTTGCTACCTCTAAAGATTCTGCAGAAAGGAGTAGAGATAGCTGAAGTGGATCTATCGACCTTAAGAATGAACTTCATGGACCTTTGTTCTGCCACTAACCACTTTAATGTTAACAATGCCATTGGAGTGGGAATGAGTGGGATAATGTATAAGGCAAACCTTCCCAATGGCTGGTCCCTTGCAGTTAAGAGGCTTTATAATTCTGAGTTCTTCCAGAGACAgtttaatttggaaaagagTATTCTGGTAAGGCCACACAGAAACATAGTTCCTCTGCTTGGTTTCTGTGTtgaaaaagaggaaaggaTTCTAGTGTACCagttcatgccaaatggaaaGCTTTCCGATTGGTTAGGTGAAGCAGTGGGATTGGAATGGCCTGTGAGGGCTAGAATTGCACTTGGGCTAGTAAGAAGCTTATCTTGGCTTCACCATGGCTTATCTTTTGTTCATCTCAGTGTTAGTTCAGAATGTATCTTGTTAGATCAGAATTTTGAGCCCAAGCTGTCCAATTTTGGAGAGGCCAAATTCATGAATCAGAACACTAATGATGAGCAGGGATTTATGAAAAAGGATGTATATGACTTCGGAATTGTGCTTTTTGAGCTGATAACAGGAGAGATTTTTAGCCAAAAGAGTGATTTCTTCAACAATTCTGAAAGCACTTTTGCCACTCACACTACCAACTTGCTGCAGAGCCCTTTTGCCTTGTCTGATACAATTGATAAATGTCTGATTGGGAATGGATTTGAGGGTGAAATCTTTAGTCTTCTTACAATTGCATGTGATTGCGTTCAGAGCTTGCCAGAAGAAAGGCCAACAATGCCCGAAATATACAATAGAATGAGCAACTTGTGGGAAAGACATGGGCAAAGTGAAGATTCTGAGATGCCCAAGAAGTCTGCAATTGCTTCTGTAGGGACTAGGGTAGATGAAATTGTGGAGTTAGAATG 1064 0.3769 MYYCVPWAQSKKRKKNCKQNKAKKEEKEHKESNQTSKLLPLKILQKGVEIAEVDLSTLRMNFMDLCSATNHFNVNNAIGVGMSGIMYKANLPNGWSLAVKRLYNSEFFQRQFNLEKSILVRPHRNIVPLLGFCVEKEERILVYQFMPNGKLSDWLGEAVGLEWPVRARIALGLVRSLSWLHHGLSFVHLSVSSECILLDQNFEPKLSNFGEAKFMNQNTNDEQGFMKKDVYDFGIVLFELITGEIFSQKSDFFNNSESTFATHTTNLLQSPFALSDTIDKCLIGNGFEGEIFSLLTIACDCVQSLPEERPTMPEIYNRMSNLWERHGQSEDSEMPKKSAIASVGTRVDEIVELE 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00992 354 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 4 327 - -
Bva13g00992 354 Coils Coil 8 35 - -
Bva13g00992 354 Pfam Protein kinase domain 73 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00992 354 Gene3D Phosphorylase Kinase; domain 1 15 145 - -
Bva13g00992 354 Gene3D Transferase(Phosphotransferase) domain 1 146 226 - -
Bva13g00992 354 Gene3D Transferase(Phosphotransferase) domain 1 227 346 - -
Bva13g00992 354 ProSiteProfiles Protein kinase domain profile. 72 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00992 354 PANTHER RECEPTOR-LIKE PROTEIN 55 4 327 - -
Bva13g00992 354 SUPERFAMILY Protein kinase-like (PK-like) 64 322 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00992 Bva-Chr13 4765198 4766519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00992 34 327 Receptor kinase-like Gene Family AT1G69990 35.312 6.26e-57 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva13g00992 Pkinase 2.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00992 - - gmx:102664092 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00992 13 4765198 4766519 Bva14g01166 14 5673492 5675662 BWGD