Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00974 ATGCTCTCCAGAAAAATTTTCCGTCAATGGTCGCCAGCACCAATGATTCTCTTCGCTCTGTTTTATCTCTTCCTTATTACTTCATCTCAACCAGATGAAAGCCGGACACTTCTGATGCTCAAGTCTGCTCTGCAGAATTCAAATGGAGATCTTTTCCGTTCTTGGACTGAATCCAATTCAGTCTGCAACTACAGTGGAATTGTCTGCAATTCCAATGGACTTGTTGCAGAAATCAAACTCGCCAATAAACAATTGTTGGGCACTCTtccttttgattcaatttGCGAGCTGCAATCGCTTGAGAAAATTTCTATGGGGTCTAACTTCTTGCATGGCAGCATCAGTGAAGACTTGAGAAGGTGCACTAATTTGCAGCACTTGGATTTGGGTGGGAATTCGTTTACTGGTGTCATGCCTGACTTGTCTCCTTTGAACAAGTTGAAGTACTTGAATTTAAGTGCCAGCGGGATTTCTGGGGCATTTCCGTGGAAATCTTTGGAGAATCTAACTAGTCTCACTTTCTTAAGCCTTGGGGACAACTACTTGGAGAAAAGCCCTTTTCCATTGGAGGTTTTGAagcttgaaaaattatattcgcTTTACCTCACAAATTGCAGCATAACAGGGAAAATCCCATTGGGCATTGGAAATCTCACTCTACTTGAGAATCTTGAGCTTTCCGATAACCAATTGATTGGTCAAATGCCATCTGATATTGGGAAGCTGCAGAACCTCTGGCAACTCGAACTATATGACAATTTCTTGAGTGGGAAATTCCCTGATGGGTTGGGGAACCTCACAAGTCTTGTGAACTTTGATGCTTCTCATAACCAGCTTGAAGGTGATCTTTATGAGCTAAGATCATTGAAAAACCTGGTTTCTTTGCAGCTTTTTGAGAACCAATTCTCAGGAGGAATCCCAGAAGAACTTGGAAATTTCAGAAACCTTTCAGAGCTTTCTCTTTACTCTAACAAGCTCACTGGTCATCTTCCTCAAAAGCTTGGCTCCTGGGGAGGCTTAGAATTCATCGATGTTTcagataattttctttcaggtTCTATACCACCTGACATGTGCAGGAACAGCAGAATGACCGACCTGCTTATGGTAAACAACAGCTTTACAGGGAGCATACCAGAAAACTATGCAAACTGTTCTTCTTTGAAACGGTTGCGtgtaaataacaataatttttctggTATTGTTCCTTCAGGGATATGGGGTTTGCCAAATCTAGTAATAATTGATCTTTCAATGAACCAGTTTGAAGGATCAGTAACTTATAATATTGCTGAAGCAAAATCTCTTGCTCAGCTGTTTTTATTTGACAATCAATTCTCAGGTGAGCTACCATTGACGATCTCAGAAGTTTCTTCATTGGTCTCGATTAAGCTGAGCTCAAATCAGTTTTCTGGTCACATTCCTGAAACAATTGGCAGCTTGAAGAAGCTGAGCAGTCTTATTTTAGATAAGAACAAGTTTTCTGGCACTATACCAGAGTCTTTAAGTTCTTGTGTTTCTCTCAGTGAAATAAACATTGCTTTTAATTCACTTTCTAGGGAAATTCCTGCTAGTCTTGGGTCTCTGCGTAATCTTAACTCATTGAACTTGTCCTCAAATAGACTTTCTGGGGAAATTCCATCAACTTTGTCATCTTCGATACTTAGCCTTCTTGATCTAAGATACAACCTCTTGTTTGGTCCCATACCACAATCACTCTCTATTCAAGCATTTAAAGAAGCCTTTGATGGAAATCCAGGCTTATGCAGCTGGAATTTGGAAGGTTTCCGGTCATGTTCATCGGATGCCAGAAGCTCCACCCGAACCCGAACCCGAACAACCCTTATATCTTGTTTCATTGCTGCAATTATGGTTCTGCTGGTCTTATTAGCTTGTTTCATTTCTGTGAAATTGAAACAGCATAAGTTGGAGCAGTCACTTAGTACTAATTCTTGGGATTTGAAGCAATACCGTGTTCTAAActtcaatgaaaatgaagttaTTCATGGGATCAAACAGGAGAATTTGATTGGCAGAGGAGGGTCAGGGAATGTTTACAAGGTTGTGCTTAAAAGTGGTAAAGAATTGGCAGTTAAGCATATATGGACTTCACATCCGGGTGACTGGAGAAGTTGCCGGAGCAGCACAGCTATGTTAAAAAGAAGTTCCCGGTCATTGGAGTATGATGCTGAGGTTGCCACACTAAGCTCCATAAGGCATGTGAATGTGGTGAAGCTCTACTGCAGCATCACAAGTGAAGATAGTAATTTACTCGTTTATGAGTACTTACCAAATGGGAGCTTGTGGGACAGGCTGCACACCTGTAGGAAGACTGAAATTGGATGGGAAATTAGGTATGAGATAGCAATTGGGGCTGGAAGGGGGTTGGAGTATCTGCACCATGGCTGTGATAGACAAGTTATACACAGGGATGTGAAGTCCGGTAACATATTGCTAGATGAGGATTGGAAGCCAAGAATTGCTGATTTTGGCCTTGCCAAGATAGTGCAGGGAGAAGGTAATTGGACCAATGTCATTGCTGGAACACTTGGATACATGGCTCCAGAGTATGCCTACACTTCTAAAGTGACTGAGAAAAATGATGTTTACAGCTTTGGAGTGGTGCTAATGGAATTGGTAACAGGAAAGAGGCCTATTGAACCAGAATTTGGAGAGAACAAGGACATAGTCTACTGGGTAAGCAGCAACATGAGGAGCAAAGAAGATGGGATTCAACTGGTGGATTCTACCATTGTTGAGCAGCTAAAAGAAGATGCCGTGAAAGTTTTGAGGATTGCAATTCTCTGCACAGCAAAGATTCCAGCTTCAAGACCTTCCATGAGAATGGTGGTTCAAATGTTGGAAGAGGCAGAACCTAGTTATTTATCCAATGTTATTGTGAACAACGACGGTCAAAACTA 2921 0.404 MLSRKIFRQWSPAPMILFALFYLFLITSSQPDESRTLLMLKSALQNSNGDLFRSWTESNSVCNYSGIVCNSNGLVAEIKLANKQLLGTLPFDSICELQSLEKISMGSNFLHGSISEDLRRCTNLQHLDLGGNSFTGVMPDLSPLNKLKYLNLSASGISGAFPWKSLENLTSLTFLSLGDNYLEKSPFPLEVLKLEKLYSLYLTNCSITGKIPLGIGNLTLLENLELSDNQLIGQMPSDIGKLQNLWQLELYDNFLSGKFPDGLGNLTSLVNFDASHNQLEGDLYELRSLKNLVSLQLFENQFSGGIPEELGNFRNLSELSLYSNKLTGHLPQKLGSWGGLEFIDVSDNFLSGSIPPDMCRNSRMTDLLMVNNSFTGSIPENYANCSSLKRLRVNNNNFSGIVPSGIWGLPNLVIIDLSMNQFEGSVTYNIAEAKSLAQLFLFDNQFSGELPLTISEVSSLVSIKLSSNQFSGHIPETIGSLKKLSSLILDKNKFSGTIPESLSSCVSLSEINIAFNSLSREIPASLGSLRNLNSLNLSSNRLSGEIPSTLSSSILSLLDLRYNLLFGPIPQSLSIQAFKEAFDGNPGLCSWNLEGFRSCSSDARSSTRTRTRTTLISCFIAAIMVLLVLLACFISVKLKQHKLEQSLSTNSWDLKQYRVLNFNENEVIHGIKQENLIGRGGSGNVYKVVLKSGKELAVKHIWTSHPGDWRSCRSSTAMLKRSSRSLEYDAEVATLSSIRHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCRKTEIGWEIRYEIAIGAGRGLEYLHHGCDRQVIHRDVKSGNILLDEDWKPRIADFGLAKIVQGEGNWTNVIAGTLGYMAPEYAYTSKVTEKNDVYSFGVVLMELVTGKRPIEPEFGENKDIVYWVSSNMRSKEDGIQLVDSTIVEQLKEDAVKVLRIAILCTAKIPASRPSMRMVVQMLEEAEPSYLSNVIVNNDGQN 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00974 973 ProSitePatterns Protein kinases ATP-binding region signature. 677 699 IPR017441 GO:0005524
Bva13g00974 973 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Bva13g00974 973 Pfam Protein kinase domain 673 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00974 973 Gene3D Ribonuclease Inhibitor 30 188 IPR032675 -
Bva13g00974 973 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Bva13g00974 973 Gene3D Ribonuclease Inhibitor 286 601 IPR032675 -
Bva13g00974 973 ProSiteProfiles Protein kinase domain profile. 671 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00974 973 Gene3D Phosphorylase Kinase; domain 1 655 762 - -
Bva13g00974 973 PANTHER RECEPTOR-LIKE PROTEIN KINASE HAIKU2 12 965 - -
Bva13g00974 973 SUPERFAMILY Protein kinase-like (PK-like) 663 955 IPR011009 -
Bva13g00974 973 Pfam Leucine Rich Repeat 123 138 IPR001611 GO:0005515
Bva13g00974 973 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 965 - -
Bva13g00974 973 Gene3D Ribonuclease Inhibitor 189 285 IPR032675 -
Bva13g00974 973 SUPERFAMILY L domain-like 362 593 - -
Bva13g00974 973 SMART LRR_typ_2 121 144 IPR003591 -
Bva13g00974 973 SMART LRR_typ_2 169 189 IPR003591 -
Bva13g00974 973 SMART LRR_typ_2 218 242 IPR003591 -
Bva13g00974 973 SMART LRR_typ_2 385 408 IPR003591 -
Bva13g00974 973 SMART LRR_typ_2 529 553 IPR003591 -
Bva13g00974 973 SMART LRR_typ_2 313 337 IPR003591 -
Bva13g00974 973 SMART LRR_typ_2 481 505 IPR003591 -
Bva13g00974 973 SUPERFAMILY RNI-like 78 399 - -
Bva13g00974 973 SMART serkin_6 671 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g00974 973 Pfam Leucine rich repeat 483 542 IPR001611 GO:0005515
Bva13g00974 973 Gene3D Transferase(Phosphotransferase) domain 1 763 969 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00974 Bva-Chr13 4690708 4694184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00974 18 970 Receptor kinase-like Gene Family AT1G09970 56.504 0.0 1042
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva13g00974 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00974 - - ccaj:109814095 1314.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00974 13 4690708 4694184 Bva13g00974 13 4690708 4694184 ECH