Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00960 ATGGAGAACTATACGTACACTTCATACCCAGATTCGGGTGATTCTTCTCCTCGCTCTAGAGAGATTGAGTTCGAGAACCCACCACCGTGGGACGATCAGCAACCCCCACCGAACTACAAAGCTAAATTCATCTGTAGTTATGGCGGCGGCAAGATCCAGCCTCGGAGCCACGACAACCAACTCTCTTATGTTGGAGGCGAGACCAAGATCCTCGCGGTTGACCGGAACATCAAGTTCCCCGCCATGATTTCGAAGCTTTCTGCTCTTTGTGATGCAGATGTTACCTTCAAGTACCAGCTTCCCGGTGAAGATCTCGACGCTTTGATTTCTGTCACCAACGACGATGATCTCGAGCACATGATGCATGAGTATGATCGGCTCTACCGACCTTCAGCTAAGCCGGTTCGGATGCGGCTCTTCCTCTTCCCCGTCGACAACCAGCCGCCGGCGAGCTTTGGGTCCGATCGGGACCGGTTCGTGGAGGCTTTAAATACCGGTCCAGGTTTAGTACCACCTGACCCGGTGAAGAATGCGCCAGGTGCTAACAACGTCGATTTCCTCTTCGGTCTAGATAAGGGGGTTCCTCCGGCGGCACAGCCGCCTCCAGTTGGTGCGAAGTTTCATGATCCAGTGCCGGAACCGGTGGCTCCACCACCCGAGTATCAAGTACGAGGAGTTGCCCCTGGTGATCGGGTCCCGGGATCTGATCCGGTTGTGAGCCCGATTGAGATGCAGAGGCAGTTACAGCAGGAGATGCAGCGCCTACAAATTTCGGAACAAGAACAAGCTGCTTATCGGAGAAGAAGCGAAGACAATCTGGTCGGAGGCTACCCCGCCGGAGATTATTACGTGCAGAAGTTCCCGGAGAAAGCTCCTTCTTCTAATGTACCAGCAACCGCGCAACACCCTGGCTATTGGCCTGGAAAACAAGTGCCCGGTGATGGTTTTCCGGCGACGGTGTCAGGAGGGGACCAAGCAGTTTACGTAATTCCGGCGCCGGGAACATTCTATCACGCGCCGATCATGCGTGCTCCAGCGGTACCCGCACCCGCCACTCAAGGCTACTACACAGTGCAGCGAATGGCTTCTGATGGTTACCGTGAACAGCCAATGTACAGCGCCGTACAACCTCCGAAAGCGCCATTTTCGTCAGCTCCAGCCACTATGGCACCTGCGCAGCAGGTTAAACCCTCCACGTATGCAGAAGGATACGGCGTCGTTCGGCCAGCTGGGATGCCTGATAATATTAATGCAGCTCCGTACGCACAGTTGGCGTATGATAGTGCAGCTGGAAGACAGGTTTACTATACTGCGCCATCAGGTGTGATGCACTCTCCGCCGTACCAAGGGGTAGCTCCCGCAGTTAGCGCGGACAATAGACCACCTGCAGTGGCTTCAATGGGTCAGGAGGTTAAGGCAGTAAATAAGGTTTCTCAAGGTTCAGTGTG 1448 0.5463 MENYTYTSYPDSGDSSPRSREIEFENPPPWDDQQPPPNYKAKFICSYGGGKIQPRSHDNQLSYVGGETKILAVDRNIKFPAMISKLSALCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRPSAKPVRMRLFLFPVDNQPPASFGSDRDRFVEALNTGPGLVPPDPVKNAPGANNVDFLFGLDKGVPPAAQPPPVGAKFHDPVPEPVAPPPEYQVRGVAPGDRVPGSDPVVSPIEMQRQLQQEMQRLQISEQEQAAYRRRSEDNLVGGYPAGDYYVQKFPEKAPSSNVPATAQHPGYWPGKQVPGDGFPATVSGGDQAVYVIPAPGTFYHAPIMRAPAVPAPATQGYYTVQRMASDGYREQPMYSAVQPPKAPFSSAPATMAPAQQVKPSTYAEGYGVVRPAGMPDNINAAPYAQLAYDSAAGRQVYYTAPSGVMHSPPYQGVAPAVSADNRPPAVASMGQEVKAVNKVSQGSV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00960 482 Coils Coil 248 268 - -
Bva13g00960 482 SMART PB1_new 56 144 IPR000270 GO:0005515
Bva13g00960 482 CDD PB1_UP2 44 142 - -
Bva13g00960 482 SUPERFAMILY CAD & PB1 domains 57 151 - -
Bva13g00960 482 MobiDBLite consensus disorder prediction 1 15 - -
Bva13g00960 482 Pfam PB1 domain 57 143 IPR000270 GO:0005515
Bva13g00960 482 Gene3D - 62 143 - -
Bva13g00960 482 PANTHER OS05G0427100 PROTEIN-RELATED 1 472 - -
Bva13g00960 482 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P (PB1) DOMAIN PROTEIN 1 472 - -
Bva13g00960 482 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00960 Bva-Chr13 4617798 4619522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00960 39 165 MAP Kinase Kinase Kinase AT5G57610 44.030 1.60e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00960 - - adu:107480527 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00960 13 4617798 4619522 Bva14g01130 14 5481609 5483346 BWGD