Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00945 ATGCTTCGAAATTGGAATCTGCTCTTAATTTTACGTTTGAATGTTTGTAGTAAGGAAGTTGACTATTTGAGGCCCCACATTTTTGCTTTGGCAAGTTCCCGATTCTCCACAGCCGCTGAGCCATCTTCCAAGCAGCGTAATCCCCCGAGGGTCCCAAATCTTATCGGGGGCAGATTTGTTGAATCACAATCCTCAAATTTTCTAGATGTCATAAACCCTGCAACACAAGAAGTTGTTGCACAACTTCCTTTGACCACACATGACGAGTTTAAAGCTGCAGTGTCCGCAGCGAAGAATGCATTTCCTTCATGGCGCAATACACCAATTACAACACGCCAGCGTATTATGTTAAAGCTCCAGGAGCTTATACCCAGAGACATGGATAAACTTGCTCTGAATGTGACCACTGAACAAGGAAAGACATTGAAAGATGCACAAGGGGATGTATTTCGTGGTTTAGAGGTGGTTGAACATGCTTGTGGGATGGCAACTCTGCAAATGGGAGAGTATGTTTCTAATATGTTCCCAGTGGCAGTTACCTGTGGCAATACCTTTGTTCTAAAGCCATCAGAAAAAGATCCAGGTGCTGCTGTAAAGCTTGCTGAATTAGCATTGGAGGCTGGTTTGCCTGATGGTGTCTTAAACATTGTTCATGGGACCCATGATATTGTGAATGCTATCTGTGATGACGACGACATTGAAGCTATATCTTTTGTTGGTTCAAATGTTgCGGGTATGCACATATATTCAAGAGCATCAGCTAAAGGAAAATGCGTTCAATCTAATATGGGGGCCAAAAATCATGCAATCGTCATGCCTGATGCAAATGTTGATGCTGCTTTAAATGCCTTAGTTGCTGCTGGTTTTGGCGCTGCTGGACAAAGGTGCATGGCTCTCAGCACAGTTGTTTTTGTTGGAGGCTCAAAACCATGGGAAACTGAACTAGTGGGGCGTACAAAAGCTCTTAAAGTAAATGCTGGAACTGAACCTGATGCAGATCTTGGTCCTGTCATCAGCAAACAGGCAAAGGAGCGGATACACAAATTGATTCAATCTGGTGTGGATGATGGTGCCAGACTACTGCTTGATGGAAGAAGTATAGTGGTACCTGGATATGAATCTGGAAAATTTTATTGGCCCAACCATCTTATCAAATGTTACTCCCCACATGGAGTGCTATCAGGAGGAAATTTTTGGTCCAGTTCTTCTTCTCATGGagCTTCGAGAAGGCCATTAACATTGTCAACCAAAACAAGTCTGGTCCAAACAATTCTTCCTTGCTGTCATTGCTTTTTGTTAGATTACTATAAGTTTCACTCATGCTGTAACTTCTGCAGGTACGGAAATGGTGCCGCTATATTTACCACATCCGGTGTTGCTGCAAGAAAATTTCAGACTGAGATCGAGGCGGGACAGGTTGGCATCAACGTTCCTATTCCAGTTCCTTTGCCCTTTTTCTCATTTACCGGCAACAAGGCATCATTTGCAGGGGACCTCAATTTCTATGGCAAGGCTGGGGTTAACTTTTACACGCAGATCAAAACAGTAACTCAGAATTGGAAGGATTCAACTGGTGGTGGCAAGATTAACATGGCAATGCCAACCTCCCAAAAATCTTG 1619 0.4336 MLRNWNLLLILRLNVCSKEVDYLRPHIFALASSRFSTAAEPSSKQRNPPRVPNLIGGRFVESQSSNFLDVINPATQEVVAQLPLTTHDEFKAAVSAAKNAFPSWRNTPITTRQRIMLKLQELIPRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNMFPVAVTCGNTFVLKPSEKDPGAAVKLAELALEAGLPDGVLNIVHGTHDIVNAICDDDDIEAISFVGSNVAGMHIYSRASAKGKCVQSNMGAKNHAIVMPDANVDAALNALVAAGFGAAGQRCMALSTVVFVGGSKPWETELVGRTKALKVNAGTEPDADLGPVISKQAKERIHKLIQSGVDDGARLLLDGRSIVVPGYESGKFYWPNHLIKCYSPHGVLSGGNFWSSSSSHGASRRPLTLSTKTSLVQTILPCCHCFLLDYYKFHSCCNFCRYGNGAAIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTVTQNWKDSTGGGKINMAMPTSQKS 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00945 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 289 300 IPR016160 GO:0016491
Bva13g00945 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 264 383 IPR016163 GO:0016620
Bva13g00945 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 174 263 IPR016162 GO:0016491
Bva13g00945 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 442 482 IPR016163 GO:0016620
Bva13g00945 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 42 173 IPR016162 GO:0016491
Bva13g00945 539 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 31 173 IPR010061 GO:0004491
Bva13g00945 539 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 442 539 IPR010061 GO:0004491
Bva13g00945 539 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 174 383 IPR010061 GO:0004491
Bva13g00945 539 CDD ALDH_F6_MMSDH 51 520 IPR010061 GO:0004491
Bva13g00945 539 Pfam Aldehyde dehydrogenase family 173 381 IPR015590 GO:0016491
Bva13g00945 539 Pfam Aldehyde dehydrogenase family 442 516 IPR015590 GO:0016491
Bva13g00945 539 Pfam Aldehyde dehydrogenase family 59 171 IPR015590 GO:0016491
Bva13g00945 539 SUPERFAMILY ALDH-like 441 521 IPR016161 GO:0016491
Bva13g00945 539 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 31 173 - -
Bva13g00945 539 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 442 539 - -
Bva13g00945 539 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 174 383 - -
Bva13g00945 539 SUPERFAMILY ALDH-like 48 380 IPR016161 GO:0016491
Bva13g00945 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 483 515 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00945 Bva-Chr13 4457607 4462248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00945 11 504 Aldehyde Dehydrogenase Gene Family AT2G14170 66.160 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00945 K00140 - csin:114261333 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00945 13 4457607 4462248 Bva13g00945 13 4457607 4462248 ECH