Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00926 ATGGAACAGGTGTTTGAAAGGTACAATCTGCATTCAGAAGTTCAGAGTCATTCATCTAGAGAGCTGCAGATTGAGAGTGAATCCTACAATAAGCTGCGCAAGGAAGCAGCCGATAAGACCCATGAACTGAGACAGTTAAATGGGGAAGAGCTGCAAGGATGCTCACTGAGAGAATTACAGAAACTAGAGGAACAAATTAAGATGGGTTTGAGACGTGTTTCAAAAGCAAAAgATGAAAGACTCGTGAGAGATATTAGTGTGCTCAAGAGAAAGGGAGTCCAAATGATGCAAGAGAACCGACAACTGAAACAGAGGGTTGCTTGTGAACAAGGGCAGTCATCTGAGCCAATCACTATATGCAGCTTATCTGATTCTCCCCAAGACCATGATTGTTCTGATACCTCTCTCAAGCTGGGGTTGcccaattataaata 434 0.4194 MEQVFERYNLHSEVQSHSSRELQIESESYNKLRKEAADKTHELRQLNGEELQGCSLRELQKLEEQIKMGLRRVSKAKDERLVRDISVLKRKGVQMMQENRQLKQRVACEQGQSSEPITICSLSDSPQDHDCSDTSLKLGLPNYK 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00926 144 Coils Coil 59 79 - -
Bva13g00926 144 PANTHER MADS-BOX PROTEIN SVP-LIKE 2 141 - -
Bva13g00926 144 Coils Coil 29 49 - -
Bva13g00926 144 Pfam K-box region 21 106 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva13g00926 144 PANTHER MADS BOX PROTEIN 2 141 - -
Bva13g00926 144 ProSiteProfiles K-box domain profile. 22 114 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00926 Bva-Chr13 4311627 4325989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00926 1 141 MADS-box Gene Family AT2G22540 39.205 1.33e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00926 - - qsu:111985104 140.969