Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00925 ATGCCTTCTTGCACTAAGTTATGGGAAATAAAGGGAGGAGTTAAAAGTTCTGAATTTGAGatgttttttgcttttttaagtATGGAGCAGGTGTTTGAAAGGTACAATCTGCATTCAGAAGTTCAGAGTCATTCATCTAGAGAGCTGCAGATTGAGAGTGAATCCTACAATAAGCTGCGCAAGGAAGCAGCCGATAAGACCCATGAACTGAGACAGTTAAATGGGGAAGAGCTGCAAGGATGCTCACTGAGAGAATTACAGAAACTAGAGGAACAAATTAAGATGGGTTTGAGACGTGTTTCAAAAGCAAAAgATGAAAGACTCGTGAGAGATATTAGTGTGCTCAAGAGAAAGGGAGTCCAAATGATGCAAGAGAACCGACAACTGAAACGGAGGGTTGCTTGTGAACAAGGGCAGTCATCTGAGCCAATCACTATATGCAGCTTATCTGATTCTCCCCAAGACCATGATTGTTCTGATACCTCTCTCAAGCTGGGGTTGcccaattataaata 515 0.4 MPSCTKLWEIKGGVKSSEFEMFFAFLSMEQVFERYNLHSEVQSHSSRELQIESESYNKLRKEAADKTHELRQLNGEELQGCSLRELQKLEEQIKMGLRRVSKAKDERLVRDISVLKRKGVQMMQENRQLKRRVACEQGQSSEPITICSLSDSPQDHDCSDTSLKLGLPNYK 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00925 171 Pfam K-box region 48 133 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva13g00925 171 PANTHER MADS BOX PROTEIN 28 168 - -
Bva13g00925 171 Coils Coil 56 76 - -
Bva13g00925 171 MobiDBLite consensus disorder prediction 146 171 - -
Bva13g00925 171 Coils Coil 86 106 - -
Bva13g00925 171 PANTHER MADS-BOX PROTEIN SVP-LIKE 28 168 - -
Bva13g00925 171 ProSiteProfiles K-box domain profile. 49 141 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00925 Bva-Chr13 4307539 4321952 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00925 14 168 MADS-box Gene Family AT2G22540 38.220 6.58e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00925 - - qsu:111985104 142.124