Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00920 atgaacattGGCGGCAACAGAGCCGAAGCAGAGCGGTGGCTTTACACCGCCAACAAGGTGCTCAGCGCACGTGATCTCCATGGGGCACGCTCCTTTGCGTTGCGGGCCCGTGAATCCGACCCGAGATTCGAGGCCACCGAGCAACTGCTCGCCATCATCGACATCCTTATCGCCGGCGAGAACCGGATCAACAACCAGCATGACTGGTACGGTATCCTTCAAATCCTCCGTTACACCCAGAACATCGAGTTCATCGCCTCCCAGTACCGCCGCCTCGCCCTCATCCTCGACCCTCACCGCAACCAATTCGCCTTCGCTGCTCACGCTTTCAGCCTCGTTCATGATGCCTGGTCCGTCTTATCCAACCCAACCAAGAAGGCTCTCTACGACAACGAGCTCAGGATAGCTGCCGAACCCTTTCCACCGCCGCCTCAGGATCCGAACCCGAACCCGACTACGAATCTATTTCCACCCGGACCATCCCTCGCTCCGACTCCGACACCGCCGCAAAGGCAATCGCAGAATCCGGCTCGCAAAAGCCTGAAGTCCAAGGACGGGAGTGTAACTGTTgaggaagaaagacccaatCTCAATAATGTGACCGTGCCGACTCAACAGCCCGAATCAACTCCACAACCCGAGTCGAGCAGCGCGAGGGAGAATGAGACAGGAAATTTCTGGACTGCGTGCCCTTACTGTTTTGTTCTGTACGAGTACCCGAAAATTTACCAGGAGTGTACCTTGAGGTGCCCGAGCTGTAGAAGGGCGTTCCATGCTGCTATGGTACCCTCACCGGCTGTGACCGGGGAAGATACTTACTTTTGCTGTTGGGGGTTTTTCCCATTAGGTTGTTCAGCCAATTTCAAGGGGACAAGTTCTGggccttcttcttctccaaagTGGAATCCATTTTCGTCTATGTTTGCTTGCCCTTTGCAAATGGGGGCAAAGCCAAAGCCAAAGAGCTGGGCTTATTATGATGCTGAAGCTTGTGCAGCATTTGTGGAACTTTCTGATTCTGATTCAAGCGACGATGATGTTGATTGGAGAAACAGTTAtaataggaaaaagaagaggTCAAGACAGTCGACGTTTTATGTTGGCAGTAGTACGAAGAAGACATCTACCGAAAGGGGAAAGAATAAGAAAGGGAATAACAGTGGTGCAGGCCATAACAAGCTGAATAATGGTGGGTCTGCATTGCTAAGTGCCACAAGAGCGGAGCCTAGTAAGAAAGCTGTGTTGGGTAGCTCCAGGAGGAGGGGTGCAGCGGACTTGGGAAAATTGGATTTGAATGTCGAGTTTAGTAACGAGGTGGAGGAGCCCAATCAGGGAATTCGTGAACGTGAAGGGCGTGAAGGGCATGGGACTGGAAATGAAGCTGATAACATTGAAGGGATTGGGTTTTTTGAGGGTCTTGATGAGTTCCTGAGCAGTCTGCCCATTCTCAATGTTGTTGATGACAAGGTTAAGAGTCATTA 1481 0.4983 MNIGGNRAEAERWLYTANKVLSARDLHGARSFALRARESDPRFEATEQLLAIIDILIAGENRINNQHDWYGILQILRYTQNIEFIASQYRRLALILDPHRNQFAFAAHAFSLVHDAWSVLSNPTKKALYDNELRIAAEPFPPPPQDPNPNPTTNLFPPGPSLAPTPTPPQRQSQNPARKSLKSKDGSVTVEEERPNLNNVTVPTQQPESTPQPESSSARENETGNFWTACPYCFVLYEYPKIYQECTLRCPSCRRAFHAAMVPSPAVTGEDTYFCCWGFFPLGCSANFKGTSSGPSSSPKWNPFSSMFACPLQMGAKPKPKSWAYYDAEACAAFVELSDSDSSDDDVDWRNSYNRKKKRSRQSTFYVGSSTKKTSTERGKNKKGNNSGAGHNKLNNGGSALLSATRAEPSKKAVLGSSRRRGAADLGKLDLNVEFSNEVEEPNQGIREREGREGHGTGNEADNIEGIGFFEGLDEFLSSLPILNVVDDKVKSH 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00920 493 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 493 - -
Bva13g00920 493 MobiDBLite consensus disorder prediction 381 399 - -
Bva13g00920 493 MobiDBLite consensus disorder prediction 441 459 - -
Bva13g00920 493 MobiDBLite consensus disorder prediction 136 221 - -
Bva13g00920 493 SUPERFAMILY Chaperone J-domain 62 133 IPR036869 -
Bva13g00920 493 MobiDBLite consensus disorder prediction 137 171 - -
Bva13g00920 493 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Bva13g00920 493 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Bva13g00920 493 CDD DnaJ 68 122 IPR001623 -
Bva13g00920 493 MobiDBLite consensus disorder prediction 192 221 - -
Bva13g00920 493 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 4 493 - -
Bva13g00920 493 MobiDBLite consensus disorder prediction 439 464 - -
Bva13g00920 493 Pfam DnaJ domain 68 130 IPR001623 -
Bva13g00920 493 MobiDBLite consensus disorder prediction 360 399 - -
Bva13g00920 493 Gene3D DnaJ domain 62 138 IPR036869 -
Bva13g00920 493 SMART dnaj_3 67 125 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00920 Bva-Chr13 4268239 4270256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00920 9 492 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 40.472 2.37e-105 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g00920 - - gmx:100788733 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00920 13 4268239 4270256 Bva14g01091 14 5196311 5200203 BWGD