Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g00885 ATGGCATCTATTCAACCTGATGCTACTTACAACGAACCCAACAATAGCTCTAGAAATGAGGAAATCAACAGAGACATTGTTATCTCATTTGAGAATGAAGACACCAAGTTCACGCATAGCAGTGAAGGTAATCAGAGAGAGGTGCAGACCATACAGGTGACCTGGGAGGATTTGTGGGTGACTGTCCCAAATGGAAAGAGTAGGAAACCAATACTGCAGGGTCTCACTGGTTATGCCAAGCCAGGAGAGCTCTTGGCTATAATGGGTCCGTCTGGTTGTGGCAAATCCACACTTCTTGATGCTTTGGCAGGAAGATTAGCTTCAAACACAAAGCAAAATGGGAAAATTCTTATCAATGGCCACAAGCAAGCACTGGCTTATGGAACATcaGCTTATGTAACGCAAGATGATGCTATGCTGCATACCTTGACAACTGGAGAAGCTGTATACTACTCAGCTCAGCTTCAGTTTCCAGATTCCATGCCAAAGGcagagaagaaggaaagagcAGAAATAACAATCAGAGAAATGGGTCTGCAAGATGCCATTAACACAAGGATTGGAGGGTGGACTTCTAAAGGCCTCAGTGGAGGGCAAAAGAGAAGACTTAGCATCTGCATAGAGATTCTAACGCGCCCGAGGCTTCTCTTCCTTGATGAACCAACTAGTGGGCTTGACAGTGCAGCGTCCTATTATGTTATGAGCAGAATTGCAAGTCTAAATCTGAGGGATGGGATTAAAAGGACTATTGTTGCATCCATCCATCAGCCCAGTAGTGaagtttttcaactttttcatAACTTGTGCCTTCTATCTTCTGGTGAAACAGTGTACTTTGGCCCTGCTTCTGATGCAAATGAGTTTTTCGCTTCAAATGGTTTTCCTTGCCCAGCTCTCCACAACCCTTCTGATCATTTCTTAAGGATCATAAACAAGGATTTTAAAGAGGATGCGAAAGGAGGCCTTGGTGCAGGAGTAAGCACAGAAGAAGCAAACGATATCCTCTTAAAATCTTATAGATCTTCTGCAATCAATGACAAAGTTCAGAAAGAAGTGGCTGAAATATGTGGAAGTGATTCTGGAGAGattgagaagagaagaagtcATGCTGGATTCCTTGCTCAATGCCTTGTTCTTATAAGAAGATCTTCACTGCACATGTATCGCGATATAAGTAATTACTGGTTGCGTCTAGTTGTCAATGTTACCATAGCTATAAGTCTTGGAACCATCTTCTATGACGTCGCCTCAAGCAGTGAATCCATTCAGGCTAGAGGGTCCATGatcactttttttgtttcagtcATAACTTTCATAACCCTTATCGGTGGATTCCCTCCTTTTATTGAGGAAATGAAGGTATTTGAACGAGAGAGATTAAATGGGCATTATGGTGTCTCTGCATTTCTGATTGGCAATATACTCTCAGCTGCTCCATACATGTTATTAGTCTCTTTCATTCCTGCAGCAATAGCCTATTATCTTTCTGGTCTGCAGAAAGGATGTGAACACTTTCTGTATTTCGCCTGTGTTCTATTTGCCACTGTGATGTCAGTTGAGAGCCTCATGATGCTTGTAGCGAGTGTGTTCCCCAATTTCATAATGGGCATGATTATTGTTGGAGGACTTCAAGGACACATGATTCTACTAGGTGGATTTTATCGTCTGCCAGATGATCTTCCTAAGATATTCTGGAGATACCCTTTATTCTATGTTTCCTTCCATAAGTATGCAGTCCAAGGATTGTTCAAGAATGAGTTTGATGGATTAACATTTTCTAgagaacaaatgaaaattagtGGTAAAGAAATACTCGAGCAGACATGGCAGGTGAAAATGGATCACTCCAAGTGGGTGGATCTTGCTGTTTTGCTGGGAATGATTGTGTTCAGTAGGTTTATGTTCTTGGGTGTTGTTAAGATCAAGGAGAGGTTGAAGCCTCTTCGTTCAGCCCTTAATTCTCCCTA 1967 0.4032 MASIQPDATYNEPNNSSRNEEINRDIVISFENEDTKFTHSSEGNQREVQTIQVTWEDLWVTVPNGKSRKPILQGLTGYAKPGELLAIMGPSGCGKSTLLDALAGRLASNTKQNGKILINGHKQALAYGTSAYVTQDDAMLHTLTTGEAVYYSAQLQFPDSMPKAEKKERAEITIREMGLQDAINTRIGGWTSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLNLRDGIKRTIVASIHQPSSEVFQLFHNLCLLSSGETVYFGPASDANEFFASNGFPCPALHNPSDHFLRIINKDFKEDAKGGLGAGVSTEEANDILLKSYRSSAINDKVQKEVAEICGSDSGEIEKRRSHAGFLAQCLVLIRRSSLHMYRDISNYWLRLVVNVTIAISLGTIFYDVASSSESIQARGSMITFFVSVITFITLIGGFPPFIEEMKVFERERLNGHYGVSAFLIGNILSAAPYMLLVSFIPAAIAYYLSGLQKGCEHFLYFACVLFATVMSVESLMMLVASVFPNFIMGMIIVGGLQGHMILLGGFYRLPDDLPKIFWRYPLFYVSFHKYAVQGLFKNEFDGLTFSREQMKISGKEILEQTWQVKMDHSKWVDLAVLLGMIVFSRFMFLGVVKIKERLKPLRSALNSP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g00885 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 288 IPR027417 -
Bva13g00885 655 Pfam ABC-2 type transporter 255 312 IPR043926 GO:0140359
Bva13g00885 655 SMART AAA_5 81 270 IPR003593 -
Bva13g00885 655 CDD ABCG_EPDR 51 280 - -
Bva13g00885 655 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 7 647 - -
Bva13g00885 655 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524
Bva13g00885 655 Gene3D - 39 293 IPR027417 -
Bva13g00885 655 Pfam ABC transporter 73 223 IPR003439 GO:0005524
Bva13g00885 655 MobiDBLite consensus disorder prediction 1 22 - -
Bva13g00885 655 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 7 647 - -
Bva13g00885 655 Pfam ABC-2 type transporter 375 587 IPR013525 GO:0016020|GO:0140359
Bva13g00885 655 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 53 298 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g00885 Bva-Chr13 4137111 4141044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g00885 82 259 Calmodulin-binding Proteins AT2G36910 29.255 4.88e-08 54.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00885 13 4137111 4141044 Bva13g00885 13 4137111 4141044 ECH